PDB entry 6gbu

View 6gbu on RCSB PDB site
Description: crystal structure of the second sh3 domain of fchsd2 (sh3-2) in complex with the fourth sh3 domain of itsn1 (sh3d)
Deposited on 2018-04-16, released 2018-06-13
The last revision was dated 2018-07-25, with a file datestamp of 2018-07-20.
Experiment type: XRAY
Resolution: 3.44 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: F-BAR and double SH3 domains protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: FCHSD2, KIAA0769, SH3MD3
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Intersectin-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ITSN1, ITSN, SH3D1A
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: F-BAR and double SH3 domains protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: FCHSD2, KIAA0769, SH3MD3
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Intersectin-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ITSN1, ITSN, SH3D1A
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: F-BAR and double SH3 domains protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: FCHSD2, KIAA0769, SH3MD3
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Intersectin-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ITSN1, ITSN, SH3D1A
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: F-BAR and double SH3 domains protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: FCHSD2, KIAA0769, SH3MD3
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Intersectin-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ITSN1, ITSN, SH3D1A
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gbuA (A:)
asvcfvkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlvee
lsa

    Sequence, based on observed residues (ATOM records):
    >6gbuA (A:)
svcfvkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlveel
sa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gbuB (B:)
kkpeiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyv
kllsp

    Sequence, based on observed residues (ATOM records):
    >6gbuB (B:)
peiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyvkl
lsp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gbuC (C:)
asvcfvkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlvee
lsa

    Sequence, based on observed residues (ATOM records):
    >6gbuC (C:)
svcfvkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlveel
sa

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gbuD (D:)
kkpeiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyv
kllsp

    Sequence, based on observed residues (ATOM records):
    >6gbuD (D:)
kpeiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyvk
llsp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6gbuE (E:)
asvcfvkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlvee
lsa

    Sequence, based on observed residues (ATOM records):
    >6gbuE (E:)
vkalydyegqtddelsfpegaiirilwegefngrigvfpsvl

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6gbuF (F:)
kkpeiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyv
kllsp

    Sequence, based on observed residues (ATOM records):
    >6gbuF (F:)
peiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyvkl
lsp

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6gbuG (G:)
asvcfvkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlvee
lsa

    Sequence, based on observed residues (ATOM records):
    >6gbuG (G:)
vkalydyegqtddelsfpegaiirilnkenqdddgfwegefngrigvfpsvlve

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6gbuH (H:)
kkpeiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyv
kllsp

    Sequence, based on observed residues (ATOM records):
    >6gbuH (H:)
peiaqviasytatgpeqltlapgqlilirkknpggwwegelqargkkrqigwfpanyvkl
lsp