PDB entry 6gbq

View 6gbq on RCSB PDB site
Description: crystal structure of the oligomerization domain of vp35 from reston virus
Deposited on 2018-04-16, released 2018-10-10
The last revision was dated 2019-01-16, with a file datestamp of 2019-01-11.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (1-63)
      • expression tag (64-70)
  • Chain 'B':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (1-63)
      • expression tag (64-65)
  • Chain 'C':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (1-63)
      • expression tag (64-69)
  • Chain 'D':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (1-63)
      • initiating methionine (0)
      • expression tag (64-67)
  • Chain 'E':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (1-End)
      • initiating methionine (0)
  • Chain 'F':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (Start-63)
      • expression tag (64-70)
  • Chain 'G':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (1-63)
      • initiating methionine (0)
      • expression tag (64-65)
  • Chain 'H':
    Compound: Polymerase cofactor VP35
    Species: Reston ebolavirus [TaxId:186539]
    Gene: VP35, REBOVgp2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JPY0 (Start-63)
      • expression tag (64-67)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gbqA (A:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqA (A:)
lkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvaky
dllehhhhhh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gbqB (B:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqB (B:)
lkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvaky
dlleh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gbqC (C:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqC (C:)
lkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvaky
dllehhhhh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gbqD (D:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqD (D:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhh

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6gbqE (E:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqE (E:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
yd

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6gbqF (F:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqF (F:)
vedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvakydll
ehhhhhh

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6gbqG (G:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqG (G:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydlleh

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6gbqH (H:)
mlkkvedtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvak
ydllehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gbqH (H:)
edtltmlvnatsrqnaaiealenrlstlesslkpiqdmgkvisslnrscaemvakydlle
hhh