PDB entry 6gaf
View 6gaf on RCSB PDB site
Description: bacteriorhodopsin, 590 fs state, real-space refined against 15% extrapolated structure factors
Class: membrane protein
Keywords: Membrane protein, proton pump, time-resolved crystallography, free-electron laser
Deposited on
2018-04-11, released
2019-04-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-07-31, with a file datestamp of
2019-07-26.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: bacteriorhodopsin
Species: Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) [TaxId:64091]
Gene: bop, VNG_1467G
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6gafa_ - Heterogens: RET, L2P, TRD, D10, HP6, OCT, MYS, UND, DD9, C14, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6gafA (A:)
qaqitgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsm
llgygltmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimig
tglvgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvv
lwsaypvvwligsegagivplnietllfmvldvsakvgfglillrsraifgeaeapepsa
gdgaaatsd
Sequence, based on observed residues (ATOM records): (download)
>6gafA (A:)
itgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsmllg
ygltmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimigtgl
vgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvvlws
aypvvwligsegagivplnietllfmvldvsakvgfglillrsraifgeae