PDB entry 6g94

View 6g94 on RCSB PDB site
Description: Structure of E. coli hydrogenase-1 C19G variant in complex with cytochrome b
Class: oxidoreductase
Keywords: new [4Fe-4S] cluster, OXIDOREDUCTASE
Deposited on 2018-04-10, released 2018-06-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: hyaC, b0974, JW0956
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: hyaC, b0974, JW0956
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Hydrogenase-1 large chain
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: hyaB, b0973, JW0955
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6g94j_
  • Chain 'K':
    Compound: Hydrogenase-1 large chain
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: hyaB, b0973, JW0955
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6g94k_
  • Chain 'L':
    Compound: Hydrogenase-1 large chain
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: hyaB, b0973, JW0955
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6g94l_
  • Chain 'M':
    Compound: Hydrogenase-1 large chain
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: hyaB, b0973, JW0955
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6g94m_
  • Chain 'Q':
    Compound: Hydrogenase-1 small chain
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: hyaA, b0972, JW0954
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69739
      • conflict (18)
  • Chain 'R':
    Compound: Hydrogenase-1 small chain
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: hyaA, b0972, JW0954
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69739
      • conflict (18)
  • Chain 'S':
    Compound: Hydrogenase-1 small chain
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: hyaA, b0972, JW0954
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69739
      • conflict (18)
  • Chain 'T':
    Compound: Hydrogenase-1 small chain
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: hyaA, b0972, JW0954
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69739
      • conflict (18)
  • Heterogens: SF4, F3S, ER2, FCO, NI, MG, CL, HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >6g94J (J:)
mstqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiil
qgrdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhl
vhfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlg
ifrngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpca
inidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkc
vlsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndq
vgrhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliay
hkgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkng
nlatastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprd
pkgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

    Sequence, based on observed residues (ATOM records): (download) 
    >6g94J (J:)
stqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiilq
grdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhlv
hfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlgi
frngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpcai
nidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkcv
lsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndqv
grhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliayh
kgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkngn
latastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprdp
kgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6g94K (K:)
mstqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiil
qgrdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhl
vhfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlg
ifrngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpca
inidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkc
vlsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndq
vgrhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliay
hkgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkng
nlatastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprd
pkgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

    Sequence, based on observed residues (ATOM records): (download) 
    >6g94K (K:)
stqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiilq
grdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhlv
hfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlgi
frngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpcai
nidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkcv
lsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndqv
grhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliayh
kgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkngn
latastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprdp
kgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6g94L (L:)
mstqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiil
qgrdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhl
vhfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlg
ifrngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpca
inidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkc
vlsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndq
vgrhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliay
hkgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkng
nlatastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprd
pkgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

    Sequence, based on observed residues (ATOM records): (download) 
    >6g94L (L:)
stqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiilq
grdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhlv
hfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlgi
frngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpcai
nidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkcv
lsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndqv
grhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliayh
kgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkngn
latastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprdp
kgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >6g94M (M:)
mstqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiil
qgrdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhl
vhfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlg
ifrngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpca
inidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkc
vlsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndq
vgrhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliay
hkgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkng
nlatastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprd
pkgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

    Sequence, based on observed residues (ATOM records): (download) 
    >6g94M (M:)
stqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiilq
grdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchdhlv
hfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlgi
frngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpcai
nidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkcv
lsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndqv
grhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliayh
kgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkngn
latastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprdp
kgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

  • Chain 'Q':
    No sequence available.

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    No sequence available.

  • Chain 'T':
    No sequence available.