PDB entry 6g63

View 6g63 on RCSB PDB site
Description: rnase e in complex with srna rrpa
Deposited on 2018-03-31, released 2018-10-03
The last revision was dated 2018-10-31, with a file datestamp of 2018-10-26.
Experiment type: XRAY
Resolution: 3.95 Å
R-factor: N/A
AEROSPACI score: 0.07 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease E
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: rne, ams, hmp1, b1084, JW1071
    Database cross-references and differences (RAF-indexed):
    • Uniprot P21513 (Start-509)
      • engineered mutation (302)
      • engineered mutation (345)
  • Chain 'B':
    Compound: RNA (5'-r(p*ap*ap*ap*ap*ap*ap*ap*ap*ap*ap*ap*ap*up*up*up*up*up*up*up*up*up*up*u)-3')
    Species: Escherichia coli [TaxId:562]
  • Chain 'G':
    Compound: Ribonuclease E
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: rne, ams, hmp1, b1084, JW1071
    Database cross-references and differences (RAF-indexed):
    • Uniprot P21513 (0-509)
      • engineered mutation (302)
      • engineered mutation (345)
  • Chain 'L':
    Compound: Ribonuclease E
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: rne, ams, hmp1, b1084, JW1071
    Database cross-references and differences (RAF-indexed):
    • Uniprot P21513 (0-509)
      • engineered mutation (302)
      • engineered mutation (345)
  • Chain 'N':
    Compound: Ribonuclease E
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: rne, ams, hmp1, b1084, JW1071
    Database cross-references and differences (RAF-indexed):
    • Uniprot P21513 (0-509)
      • engineered mutation (302)
      • engineered mutation (345)
  • Heterogens: ZN, U

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6g63A (A:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitriepsleaafvdy
gaerhgflplkeiareyfpanysahgrpnikdvlregqevivqidkeergnkgaalttfi
slagsylvlmpnnpraggisrriegddrtelkealaslelpegmglivrtagvgksaeal
qwdlsfrlkhweaikkaaesrpapflihqesnvivrafrdylrqdigeilidnpkvlela
rqhiaalgrpdfsskiklytgeiplfshyqiesqiesafqrevrlpsggsividstealt
airinsaratrggdieetafntnleaadeiarqlrlrdlgglivirfidmtpvrhqrave
nrlreavrqdrariqishisrfgllemsrqrlspslgesshhvcprcsgtgtvrdnesls
lsilrlieeealkentqevhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqme
tphyhvlrvrkgeetptlsymlpklheeam

    Sequence, based on observed residues (ATOM records):
    >6g63A (A:)
rmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitrieeaafvdygaerh
gflplkeiareyfprpnikdvlregqevivqidkeergnkgaalttfislagsylvlmpa
ggisrriegddrtelkealaslelpegmglivrtagvgksaealqwdlsfrlkhweaikk
aaesrpapflihqesnvivrafrdylrqdigeilidnpkvlelarqhiaalgrpdfsski
klytgeiplfshyqiesqiesafqrevrlpsggsividstealtairinsaratrggdie
etafntnleaadeiarqlrlrdlgglivirfidmtpvrhqravenrlreavrqdrariqi
shisrfgllemsrqrlspslgesshhvcprcsgtgtvrdneslslsilrlieeealkent
qevhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqmetphyhvlrvrkgeetp
tlsymlpklheeam

  • Chain 'B':
    No sequence available.

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6g63G (G:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitriepsleaafvdy
gaerhgflplkeiareyfpanysahgrpnikdvlregqevivqidkeergnkgaalttfi
slagsylvlmpnnpraggisrriegddrtelkealaslelpegmglivrtagvgksaeal
qwdlsfrlkhweaikkaaesrpapflihqesnvivrafrdylrqdigeilidnpkvlela
rqhiaalgrpdfsskiklytgeiplfshyqiesqiesafqrevrlpsggsividstealt
airinsaratrggdieetafntnleaadeiarqlrlrdlgglivirfidmtpvrhqrave
nrlreavrqdrariqishisrfgllemsrqrlspslgesshhvcprcsgtgtvrdnesls
lsilrlieeealkentqevhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqme
tphyhvlrvrkgeetptlsymlpklheeam

    Sequence, based on observed residues (ATOM records):
    >6g63G (G:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitrieeaafvdygae
rhgflplkeiareyfprpnikdvlregqevivqidkeergnkgaalttfislagsylvlm
pnnpraggisrgddrtelkealaslgmglivrtagvgksaealqwdlsfrlkhweaikka
aesrpapflihqesnvivrafrdylrqdigeilidnpkvlelarqhiaalgrpdfsskik
lytgeiplfshyqiesqiesafqrevrlpsggsividstealtairinsaratrggdiee
tafntnleaadeiarqlrlrdlgglivirfidmtpvrhqravenrlreavrqdrariqis
hisrfgllemsrqrlspslgesshhvcprcsgtgtvrdneslslsilrlieeealkentq
evhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqmetphyhvlrvrkgeetpt
lsymlpklheeam

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6g63L (L:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitriepsleaafvdy
gaerhgflplkeiareyfpanysahgrpnikdvlregqevivqidkeergnkgaalttfi
slagsylvlmpnnpraggisrriegddrtelkealaslelpegmglivrtagvgksaeal
qwdlsfrlkhweaikkaaesrpapflihqesnvivrafrdylrqdigeilidnpkvlela
rqhiaalgrpdfsskiklytgeiplfshyqiesqiesafqrevrlpsggsividstealt
airinsaratrggdieetafntnleaadeiarqlrlrdlgglivirfidmtpvrhqrave
nrlreavrqdrariqishisrfgllemsrqrlspslgesshhvcprcsgtgtvrdnesls
lsilrlieeealkentqevhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqme
tphyhvlrvrkgeetptlsymlpklheeam

    Sequence, based on observed residues (ATOM records):
    >6g63L (L:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitriepsleaafvdy
gaerhgflplkeiareyfprpnikdvlregqevivqidkeergnkgaalttfislagsyl
vlmpnnpraggisrrielkealaslelpegmglivrtagvgksaealqwdlsfrlkhwea
ikkaaesrpapflihqesnvivrafrdylrqdigeilidnpkvlelarqhiaalgrpdfs
skiklytgeiplfshyqiesqiesafqrevrlpsggsividstealtairinsargdiee
tafntnleaadeiarqlrlrdlgglivirfidmtpvrhqravenrlreavrqdrariqis
hisrfgllemsrqrlspslgesshhvcprcsgtgtvrdneslslsilrlieeealkentq
evhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqmetphyhvlrvrkgeetpt
lsymlpklheeam

  • Chain 'N':
    Sequence, based on SEQRES records:
    >6g63N (N:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitriepsleaafvdy
gaerhgflplkeiareyfpanysahgrpnikdvlregqevivqidkeergnkgaalttfi
slagsylvlmpnnpraggisrriegddrtelkealaslelpegmglivrtagvgksaeal
qwdlsfrlkhweaikkaaesrpapflihqesnvivrafrdylrqdigeilidnpkvlela
rqhiaalgrpdfsskiklytgeiplfshyqiesqiesafqrevrlpsggsividstealt
airinsaratrggdieetafntnleaadeiarqlrlrdlgglivirfidmtpvrhqrave
nrlreavrqdrariqishisrfgllemsrqrlspslgesshhvcprcsgtgtvrdnesls
lsilrlieeealkentqevhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqme
tphyhvlrvrkgeetptlsymlpklheeam

    Sequence, based on observed residues (ATOM records):
    >6g63N (N:)
mkrmlinatqqeelrvalvdgqrlydldiespgheqkkaniykgkitriepsleaafvdy
gaerhgflplkeiareyfprpnikdvlregqevivqidkeergnkgaalttfislagsyl
vlmpnnpraggisrrielkealaslelpegmglivrtagvgksaealqwdlsfrlkhwea
ikkaaesrpapflihqesnvivrafrdylrqdigeilidnpkvlelarqhiaalgrpdfs
skiklytgeiplfshyqiesqiesafqrevrlpsggsividstealtairinsaratdie
etafntnleaadeiarqlrlrdlgglivirfidmtpvrhqravenrlreavrqdrariqi
shisrfgllemsrqrlspslgesshhvcprcsgtgtvrdneslslsilrlieeealkent
qevhaivpvpiasyllnekrsavnaietrqdgvrcvivpndqmetphyhvlrvrkgeetp
tlsymlpklheeam