PDB entry 6g43

View 6g43 on RCSB PDB site
Description: crystal structure of semet-labeled mavirus major capsid protein lacking the c-terminal domain
Deposited on 2018-03-26, released 2018-07-04
The last revision was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative major capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV18, Mvrk_gpp18
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Putative major capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV18, Mvrk_gpp18
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Putative major capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV18, Mvrk_gpp18
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6g43A (A:)
gamgmntppeldtvlqapyaynwptsknvkiasrigipystfqtiqpvsdapnngigqit
fnqplgnltggaprlrvsftaeikniladsslkdqiglksfpvnrsipvavinmngktft
sypaqliklhqynadplelallspcsdvdeynkikavsmnnpyrqgtestdsrmsrglgc
nyayyihpraagstsvkidfvvdealvanptqyknikdpvpfrnlntfkvildgqfkpen
migiaddvklvagkadfevditgfkinmlvqnwvapleigdipktiiyntplislegnis
smclntkdpygipgernkhiltthsmamnnvpsmfavmvsqetptkkfapdqlagiigle
ikvdsdvgifreleqqqlyelsssngynkrfscfsgalangltvadpavaagnkfkeaif
gagsviffrpsdlglkdynvmananksinmqvqatfvtpeaagtgahyklevfsirdnlt
ysfedgtfmddltlytpdqllrsplkltddnnklmrvmgg

    Sequence, based on observed residues (ATOM records):
    >6g43A (A:)
ntppeldtvlqapyaynwptsknvkiasrigipystfqtiqpvsdapnngigqitfnqpl
gnltggaprlrvsftaeikniladsslkdqiglksfpvnrsipvavinmngktftsypaq
liklhqynadplelallspcsdvdeynkikavsmnnpyrqgtestdsrmsrglgcnyayy
ihpraagstsvkidfvvdealvanptqyknikdpvpfrnlntfkvildgqfkpenmigia
ddvklvagkadfevditgfkinmlvqnwvapleigdipktiiyntplislegnissmcln
tkdpygipgernkhiltthsmamnnvpsmfavmvsqetptkkfapdqlagiigleikvds
dvgifreleqqqlyelsssngynkrfscfsgalangltvadpavaagnkfkeaifgagsv
iffrpsdlglkdynvmananksinmqvqatfvtpeaagtgahyklevfsirdnltysfed
gtfmddltlytpdqllrsplkltddnnklmrvmgg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6g43B (B:)
gamgmntppeldtvlqapyaynwptsknvkiasrigipystfqtiqpvsdapnngigqit
fnqplgnltggaprlrvsftaeikniladsslkdqiglksfpvnrsipvavinmngktft
sypaqliklhqynadplelallspcsdvdeynkikavsmnnpyrqgtestdsrmsrglgc
nyayyihpraagstsvkidfvvdealvanptqyknikdpvpfrnlntfkvildgqfkpen
migiaddvklvagkadfevditgfkinmlvqnwvapleigdipktiiyntplislegnis
smclntkdpygipgernkhiltthsmamnnvpsmfavmvsqetptkkfapdqlagiigle
ikvdsdvgifreleqqqlyelsssngynkrfscfsgalangltvadpavaagnkfkeaif
gagsviffrpsdlglkdynvmananksinmqvqatfvtpeaagtgahyklevfsirdnlt
ysfedgtfmddltlytpdqllrsplkltddnnklmrvmgg

    Sequence, based on observed residues (ATOM records):
    >6g43B (B:)
ntppeldtvlqapyaynwptsknvkiasrigipystfqtiqpvsdapnngigqitfnqpl
gnltggaprlrvsftaeikniladsslkdqiglksfpvnrsipvavinmngktftsypaq
liklhqynadplelallspcsdvdeynkikavsmnnpyrqgtestdsrmsrglgcnyayy
ihpraagstsvkidfvvdealvanptqyknikdpvpfrnlntfkvildgqfkpenmigia
ddvklvagkadfevditgfkinmlvqnwvapleigdipktiiyntplislegnissmcln
tkdpygipgernkhiltthsmamnnvpsmfavmvsqetptkkfapdqlagiigleikvds
dvgifreleqqqlyelsssngynkrfscfsgalangltvadpavaagnkfkeaifgagsv
iffrpsdlglkdynvmananksinmqvqatfvtpeaagtgahyklevfsirdnltysfed
gtfmddltlytpdqllrsplkltddnnklmrvmgg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6g43C (C:)
gamgmntppeldtvlqapyaynwptsknvkiasrigipystfqtiqpvsdapnngigqit
fnqplgnltggaprlrvsftaeikniladsslkdqiglksfpvnrsipvavinmngktft
sypaqliklhqynadplelallspcsdvdeynkikavsmnnpyrqgtestdsrmsrglgc
nyayyihpraagstsvkidfvvdealvanptqyknikdpvpfrnlntfkvildgqfkpen
migiaddvklvagkadfevditgfkinmlvqnwvapleigdipktiiyntplislegnis
smclntkdpygipgernkhiltthsmamnnvpsmfavmvsqetptkkfapdqlagiigle
ikvdsdvgifreleqqqlyelsssngynkrfscfsgalangltvadpavaagnkfkeaif
gagsviffrpsdlglkdynvmananksinmqvqatfvtpeaagtgahyklevfsirdnlt
ysfedgtfmddltlytpdqllrsplkltddnnklmrvmgg

    Sequence, based on observed residues (ATOM records):
    >6g43C (C:)
ntppeldtvlqapyaynwptsknvkiasrigipystfqtiqpvsdapnngigqitfnqpl
gnltggaprlrvsftaeikniladsslkdqiglksfpvnrsipvavinmngktftsypaq
liklhqynadplelallspcsdvdeynkikavsmnnpyrqgtestdsrmsrglgcnyayy
ihpraagstsvkidfvvdealvanptqyknikdpvpfrnlntfkvildgqfkpenmigia
ddvklvagkadfevditgfkinmlvqnwvapleigdipktiiyntplislegnissmcln
tkdpygipgernkhiltthsmamnnvpsmfavmvsqetptkkfapdqlagiigleikvds
dvgifreleqqqlyelsssngynkrfscfsgalangltvadpavaagnkfkeaifgagsv
iffrpsdlglkdynvmananksinmqvqatfvtpeaagtgahyklevfsirdnltysfed
gtfmddltlytpdqllrsplkltddnnklmrvmgg