PDB entry 6g42

View 6g42 on RCSB PDB site
Description: crystal structure of mavirus penton protein
Deposited on 2018-03-26, released 2018-07-04
The last revision was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6g42A (A:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g42A (A:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6g42B (B:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g42B (B:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6g42C (C:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g42C (C:)
mkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlp
lfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgi
igeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslviln
edvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqn
nqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfe
si

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6g42D (D:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g42D (D:)
mkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlp
lfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgi
igeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslviln
edvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqn
nqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfe
si

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6g42E (E:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g42E (E:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i