PDB entry 6g41

View 6g41 on RCSB PDB site
Description: crystal structure of semet-labeled mavirus penton protein
Deposited on 2018-03-26, released 2018-07-04
The last revision was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Minor capsid protein
    Species: Cafeteriavirus-dependent mavirus [TaxId:1932923]
    Gene: MV17, Mvrk_gpp17
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6g41A (A:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41A (A:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfesi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6g41B (B:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41B (B:)
qyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlplf
kpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgiig
eedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilned
vetqdastlefltpishiviesndlpvsyellpsiisdntgvfltnykylqqnnqdynsi
lfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfesi

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6g41C (C:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41C (C:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6g41D (D:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41D (D:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisdntgvfltnykylqqnnqdynsi
lfrvnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfesi

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6g41E (E:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41E (E:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6g41F (F:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41F (F:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6g41G (G:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41G (G:)
kqyiwlnetiksnkrpvsvdifrsstildpdknylliveefhlhkirlplfkpaghdyqv
gifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgiigeedipvfsf
nkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilnedvetqdastl
efltpishiviesndlpvsyellpsitisdntgvfltnykylqqnnqdynsilfrvenss
nkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfesi

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6g41H (H:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41H (H:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6g41I (I:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41I (I:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6g41J (J:)
gamgmkqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhk
irlplfkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlagl
cdgiigeedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeysl
vilnedvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnyky
lqqnnqdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlk
llfesid

    Sequence, based on observed residues (ATOM records):
    >6g41J (J:)
kqyiwlnetiksnkqlagprgsykrpvsvdifrsstildpdknylliveefhlhkirlpl
fkpaghdyqvgifnrstdeimgvrevdfstfvdedgymydyvdvgtainetlaglcdgii
geedipvfsfnkhskkfeitttenfrnghfimfnddmrvdfnsfefddideeyslvilne
dvetqdastlefltpishiviesndlpvsyellpsisknttisdntgvfltnykylqqnn
qdynsilfrvenssnkyhnilqtnfnrfnlsftiydydnekhpltllpqtviqlkllfes
i