PDB entry 6g3y

View 6g3y on RCSB PDB site
Description: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH5675
Class: DNA binding protein
Keywords: N-glycosylase, DNA lyase, DNA BINDING PROTEIN
Deposited on 2018-03-26, released 2018-11-28
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-11-28, with a file datestamp of 2018-11-23.
Experiment type: XRAY
Resolution: 2.51 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N-glycosylase/DNA lyase
    Species: Mus musculus [TaxId:10090]
    Gene: OGG1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08760 (Start-317)
      • conflict (2)
    Domains in SCOPe 2.07: d6g3ya1, d6g3ya2
  • Chain 'B':
    Compound: N-glycosylase/DNA lyase
    Species: Mus musculus [TaxId:10090]
    Gene: OGG1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08760 (Start-317)
      • conflict (2)
    Domains in SCOPe 2.07: d6g3yb1, d6g3yb2
  • Chain 'C':
    Compound: N-glycosylase/DNA lyase
    Species: Mus musculus [TaxId:10090]
    Gene: OGG1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08760 (1-End)
      • expression tag (0)
      • conflict (2)
    Domains in SCOPe 2.07: d6g3yc1, d6g3yc2, d6g3yc3
  • Heterogens: ELB, NI, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6g3yA (A:)
    gshmrhrtlssspalwasipcprselrldlvlasgqsfrwkeqspahwsgvladqvwtlt
    qtedqlyctvyrgddsqvsrptleeletlhkyfqldvslaqlyshwasvdshfqrvaqkf
    qgvrllrqdpteclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpnlhal
    agpeaethlrklglgyraryvrasakaileeqggpawlqqlrvapyeeahkalctlpgvg
    akvadciclmaldkpqavpvdvhvwqiahrdygwhpktsqakgpsplankelgnffrnlw
    gpyagwaqavlfsadlrq
    

    Sequence, based on observed residues (ATOM records): (download)
    >6g3yA (A:)
    hmrhrtlssspalwasipcprselrldlvlasgqsfrwkeqspahwsgvladqvwtltqt
    edqlyctvyrgddsqvsrptleeletlhkyfqldvslaqlyshwasvdshfqrvaqkfqg
    vrllrqdpteclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpnlhalag
    peaethlrklglgyraryvrasakaileeqggpawlqqlrvapyeeahkalctlpgvgak
    vadciclmaldkpqavpvdvhvwqiahrdygwhpktsqakgpsplankelgnffrnlwgp
    yagwaqavlfsadlrq
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6g3yB (B:)
    gshmrhrtlssspalwasipcprselrldlvlasgqsfrwkeqspahwsgvladqvwtlt
    qtedqlyctvyrgddsqvsrptleeletlhkyfqldvslaqlyshwasvdshfqrvaqkf
    qgvrllrqdpteclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpnlhal
    agpeaethlrklglgyraryvrasakaileeqggpawlqqlrvapyeeahkalctlpgvg
    akvadciclmaldkpqavpvdvhvwqiahrdygwhpktsqakgpsplankelgnffrnlw
    gpyagwaqavlfsadlrq
    

    Sequence, based on observed residues (ATOM records): (download)
    >6g3yB (B:)
    hmrhrtlssspalwasipcprselrldlvlasgqsfrwkeqspahwsgvladqvwtltqt
    edqlyctvyrgddsqvsrptleeletlhkyfqldvslaqlyshwasvdshfqrvaqkfqg
    vrllrqdpteclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpnlhalag
    peaethlrklglgyraryvrasakaileeqggpawlqqlrvapyeeahkalctlpgvgak
    vadciclmaldkpqavpvdvhvwqiahrdygwhpktsqakgpsplankelgnffrnlwgp
    yagwaqavlfsadlrq
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6g3yC (C:)
    gshmrhrtlssspalwasipcprselrldlvlasgqsfrwkeqspahwsgvladqvwtlt
    qtedqlyctvyrgddsqvsrptleeletlhkyfqldvslaqlyshwasvdshfqrvaqkf
    qgvrllrqdpteclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpnlhal
    agpeaethlrklglgyraryvrasakaileeqggpawlqqlrvapyeeahkalctlpgvg
    akvadciclmaldkpqavpvdvhvwqiahrdygwhpktsqakgpsplankelgnffrnlw
    gpyagwaqavlfsadlrq
    

    Sequence, based on observed residues (ATOM records): (download)
    >6g3yC (C:)
    gshmrhrtlssspalwasipcprselrldlvlasgqsfrwkeqspahwsgvladqvwtlt
    qtedqlyctvyrgddvsrptleeletlhkyfqldvslaqlyshwasvdshfqrvaqkfqg
    vrllrqdpteclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpnlhalag
    peaethlrklglgyraryvrasakaileeqggpawlqqlrvapyeeahkalctlpgvgak
    vadciclmaldkpqavpvdvhvwqiahrdygwhpktsqakgpsplankelgnffrnlwgp
    yagwaqavlfsadlr