PDB entry 6g1m

View 6g1m on RCSB PDB site
Description: amine dehydrogenase from petrotoga mobilis; open and closed form
Deposited on 2018-03-21, released 2019-03-27
The last revision was dated 2019-03-27, with a file datestamp of 2019-03-22.
Experiment type: XRAY
Resolution: 2.32 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dihydrodipicolinate reductase
    Species: Petrotoga mobilis (strain DSM 10674 / SJ95) [TaxId:403833]
    Gene: Pmob_1166
    Database cross-references and differences (RAF-indexed):
    • Uniprot A9BHL2 (1-End)
      • expression tag (0)
  • Chain 'B':
    Compound: dihydrodipicolinate reductase
    Species: Petrotoga mobilis (strain DSM 10674 / SJ95) [TaxId:403833]
    Gene: Pmob_1166
    Database cross-references and differences (RAF-indexed):
    • Uniprot A9BHL2 (1-End)
      • expression tag (0)
  • Chain 'C':
    Compound: dihydrodipicolinate reductase
    Species: Petrotoga mobilis (strain DSM 10674 / SJ95) [TaxId:403833]
    Gene: Pmob_1166
    Database cross-references and differences (RAF-indexed):
    • Uniprot A9BHL2 (1-End)
      • expression tag (0)
  • Chain 'D':
    Compound: dihydrodipicolinate reductase
    Species: Petrotoga mobilis (strain DSM 10674 / SJ95) [TaxId:403833]
    Gene: Pmob_1166
    Database cross-references and differences (RAF-indexed):
    • Uniprot A9BHL2 (1-End)
      • expression tag (0)
  • Heterogens: NAD, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6g1mA (A:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkivghigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqp
gmvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipgg
kgtiaiatnmipsvvearpglltmvdlpiprallaevh

    Sequence, based on observed residues (ATOM records):
    >6g1mA (A:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkighigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqpg
mvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipggk
gtiaiatnmipsvvearpglltmvdlpipralla

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6g1mB (B:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkivghigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqp
gmvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipgg
kgtiaiatnmipsvvearpglltmvdlpiprallaevh

    Sequence, based on observed residues (ATOM records):
    >6g1mB (B:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgikvypdpitm
vkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidtvak
dhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgttpe
efkqgiksgkivghigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqpgmv
agcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipggkgt
iaiatnmipsvvearpglltmvdlpipralla

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6g1mC (C:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkivghigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqp
gmvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipgg
kgtiaiatnmipsvvearpglltmvdlpiprallaevh

    Sequence, based on observed residues (ATOM records):
    >6g1mC (C:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkivghigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqp
gmvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipgg
kgtiaiatnmipsvvearpglltmvdlpipralla

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6g1mD (D:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkivghigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqp
gmvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipgg
kgtiaiatnmipsvvearpglltmvdlpiprallaevh

    Sequence, based on observed residues (ATOM records):
    >6g1mD (D:)
sykvgiwgfgamgsgiaknilskknlklvgvhdfreeyiekdvgellglgkigikvypdp
itmvkqtdpdlvviatnsfisvvkdqiisilkenknvitiaeemafpfskdpkaaneidt
vakdhnvsvlgtgvnpgfvldtliitltgiclnvqrikaarindlspfgptvmetqgvgt
tpeefkqgiksgkighigfeqsihmiakalgweidrieqkrepiisnvmretkyvkvqpg
mvagcnhtakafyknellielehpqqvlphlenvqtgdyitiqgdpdismginpeipggk
gtiaiatnmipsvvearpglltmvdlpipralla