PDB entry 6g11

View 6g11 on RCSB PDB site
Description: complex of rice blast (magnaporthe oryzae) effector protein avr-pike with the hma domain of pikp-1 from rice (oryza sativa)
Deposited on 2018-03-20, released 2018-06-13
The last revision was dated 2018-08-15, with a file datestamp of 2018-08-10.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: resistance protein pikp-1
    Species: Oryza sativa subsp. japonica [TaxId:39947]
    Gene: Pikp-1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: resistance protein pikp-1
    Species: Oryza sativa subsp. japonica [TaxId:39947]
    Gene: Pikp-1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: avr-pik protein
    Species: MAGNAPORTHE ORYZAE [TaxId:318829]
    Gene: AVR-Pik
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: resistance protein pikp-1
    Species: Oryza sativa subsp. japonica [TaxId:39947]
    Gene: Pikp-1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: resistance protein pikp-1
    Species: Oryza sativa subsp. japonica [TaxId:39947]
    Gene: Pikp-1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: avr-pik protein
    Species: MAGNAPORTHE ORYZAE [TaxId:318829]
    Gene: AVR-Pik
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6g11A (A:)
gpglkqkivikvamegnncrskamalvastggvdsvalvgdlrdkievvgygidpiklis
alrkkvgdaellqvsqankd

    Sequence, based on observed residues (ATOM records):
    >6g11A (A:)
kqkivikvamncrskamalvastggvdsvalvgdlrdkievvgygidpiklisalrkkvg
daellqvsqa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6g11B (B:)
gpglkqkivikvamegnncrskamalvastggvdsvalvgdlrdkievvgygidpiklis
alrkkvgdaellqvsqankd

    Sequence, based on observed residues (ATOM records):
    >6g11B (B:)
kqkivikvamncrskamalvastggvdsvalvgdlrdkievvgygidpiklisalrkkvg
daellqvsqankd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6g11C (C:)
metgnkyiekraidlsrerdpnffdnpgipvpecfwfmfknnvrqdagtcysswkmdmkv
gpnwvhiksddncnlsgdfppgwivlgkkrpgf

    Sequence, based on observed residues (ATOM records):
    >6g11C (C:)
aidlsrerdpnffdnpgipvpecfwfmfknnvrqdagtcysswkmdmkvgpnwvhiksdd
ncnlsgdfppgwivlgkkrpgf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6g11D (D:)
gpglkqkivikvamegnncrskamalvastggvdsvalvgdlrdkievvgygidpiklis
alrkkvgdaellqvsqankd

    Sequence, based on observed residues (ATOM records):
    >6g11D (D:)
kqkivikvamncrskamalvastggvdsvalvgdlrdkievvgygidpiklisalrkkvg
daellqvsqa

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6g11E (E:)
gpglkqkivikvamegnncrskamalvastggvdsvalvgdlrdkievvgygidpiklis
alrkkvgdaellqvsqankd

    Sequence, based on observed residues (ATOM records):
    >6g11E (E:)
kqkivikvamncrskamalvastggvdsvalvgdlrdkievvgygidpiklisalrkkvg
daellqvsqankd

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6g11F (F:)
metgnkyiekraidlsrerdpnffdnpgipvpecfwfmfknnvrqdagtcysswkmdmkv
gpnwvhiksddncnlsgdfppgwivlgkkrpgf

    Sequence, based on observed residues (ATOM records):
    >6g11F (F:)
aidlsrerdpnffdnpgipvpecfwfmfknnvrqdagtcysswkmdmkvgpnwvhiksdd
ncnlsgdfppgwivlgkkrpgf