PDB entry 6fz6

View 6fz6 on RCSB PDB site
Description: crystal structure of a radical sam methyltransferase from sphaerobacter thermophilus
Deposited on 2018-03-14, released 2019-04-10
The last revision was dated 2019-04-10, with a file datestamp of 2019-04-05.
Experiment type: XRAY
Resolution: 1.42 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable dual-specificity RNA methyltransferase RlmN
    Species: Sphaerobacter thermophilus (strain DSM 20745 / S 6022) [TaxId:479434]
    Gene: rlmN, Sthe_1821
    Database cross-references and differences (RAF-indexed):
    • Uniprot D1C4T7 (19-End)
      • expression tag (18)
  • Chain 'B':
    Compound: Probable dual-specificity RNA methyltransferase RlmN
    Species: Sphaerobacter thermophilus (strain DSM 20745 / S 6022) [TaxId:479434]
    Gene: rlmN, Sthe_1821
    Database cross-references and differences (RAF-indexed):
    • Uniprot D1C4T7 (19-End)
      • expression tag (18)
  • Heterogens: SF4, SAH, GOL, BR, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fz6A (A:)
mahhhhhhssglevlfqgpmalydltlaeleerlaadgvpryrarqifhwayrqlavdyd
amtvlpktlradlatrlpltpltpvrevqtddgetiktlfrtvdgqhietvlmfypdrtt
vcvscqvgcavgcsfcatgmmgltrnltagemvaqvvaaarrareagrtltnivmmgmge
pfqnyeatmrmvrilheeegmnfgarritvstsglvpfidrlarepfqvklavslhapnd
dlrsslvplnrrypigeliaacrryvgetgrrvtfeyvlidgvndsdanaeelarllrgl
lchvnliplnptpaapfgrpsverinrfeqilrargipatvrysrgvdisaacgqlraey
eavaga

    Sequence, based on observed residues (ATOM records):
    >6fz6A (A:)
pmalydltlaeleerlaadgvpryrarqifhwayrqlavdydamtvlpktlradlatrlp
ltpltpvrevqtddgetiktlfrtvdgqhietvlmfypdrttvcvscqvgcavgcsfcat
gmmgltrnltagemvaqvvaaarrareagrtltnivmmgmgepfqnyeatmrmvrilhee
egmnfgarritvstsglvpfidrlarepfqvklavslhapnddlrsslvplnrrypigel
iaacrryvgetgrrvtfeyvlidgvndsdanaeelarllrgllchvnliplnptpaapfg
rpsverinrfeqilrargipatvrysrgvdisaacgqlrae

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fz6B (B:)
mahhhhhhssglevlfqgpmalydltlaeleerlaadgvpryrarqifhwayrqlavdyd
amtvlpktlradlatrlpltpltpvrevqtddgetiktlfrtvdgqhietvlmfypdrtt
vcvscqvgcavgcsfcatgmmgltrnltagemvaqvvaaarrareagrtltnivmmgmge
pfqnyeatmrmvrilheeegmnfgarritvstsglvpfidrlarepfqvklavslhapnd
dlrsslvplnrrypigeliaacrryvgetgrrvtfeyvlidgvndsdanaeelarllrgl
lchvnliplnptpaapfgrpsverinrfeqilrargipatvrysrgvdisaacgqlraey
eavaga

    Sequence, based on observed residues (ATOM records):
    >6fz6B (B:)
pmalydltlaeleerlaadgvpryrarqifhwayrqlavdydamtvlpktlradlatrlp
ltpltpvrevqtddgetiktlfrtvdgqhietvlmfypdrttvcvscqvgcavgcsfcat
gmmgltrnltagemvaqvvaaarrareagrtltnivmmgmgepfqnyeatmrmvrilhee
egmnfgarritvstsglvpfidrlarepfqvklavslhapnddlrsslvplnrrypigel
iaacrryvgetgrrvtfeyvlidgvndsdanaeelarllrgllchvnliplnptpaapfg
rpsverinrfeqilrargipatvrysrgvdisaacgqlrae