PDB entry 6fx1

View 6fx1 on RCSB PDB site
Description: crystal structure of pholiota squarrosa lectin in complex with an octasaccharide
Deposited on 2018-03-08, released 2018-07-11
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'B':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'C':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'D':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1
  • Chain 'E':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'F':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'G':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'H':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'I':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (0-42)
  • Chain 'J':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1 (Start-42)
  • Chain 'K':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1
  • Chain 'L':
    Compound: lectin
    Species: Pholiota squarrosa [TaxId:75321]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FX1
  • Heterogens: MLI, OOA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fx1A (A:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1A (A:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fx1B (B:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1B (B:)
amapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6fx1C (C:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1C (C:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6fx1D (D:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1D (D:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfht

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6fx1E (E:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1E (E:)
amapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6fx1F (F:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1F (F:)
mapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6fx1G (G:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1G (G:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6fx1H (H:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1H (H:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >6fx1I (I:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6fx1J (J:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1J (J:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6fx1K (K:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1K (K:)
apvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfht

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6fx1L (L:)
gamapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfhtg

    Sequence, based on observed residues (ATOM records):
    >6fx1L (L:)
amapvpvtklvcdgdtykctayldfgdgrwvaqwdtnvfht