PDB entry 6fqs

View 6fqs on RCSB PDB site
Description: 3.11a complex of s.aureus gyrase with imidazopyrazinone t3 and dna
Deposited on 2018-02-14, released 2018-04-04
The last revision was dated 2018-05-16, with a file datestamp of 2018-05-11.
Experiment type: XRAY
Resolution: 3.11 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA gyrase subunit A
    Species: Staphylococcus aureus [TaxId:158879]
    Gene: gyrA, SA0006
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA gyrase subunit B,DNA gyrase subunit B
    Species: Staphylococcus aureus (strain N315) [TaxId:158879]
    Gene: gyrB, SA0005
    Database cross-references and differences (RAF-indexed):
    • Uniprot P66937 (Start-134)
      • linker (135)
    • Uniprot P66937 (137-End)
  • Chain 'C':
    Compound: DNA gyrase subunit A
    Species: Staphylococcus aureus [TaxId:158879]
    Gene: gyrA, SA0006
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: DNA gyrase subunit B,DNA gyrase subunit B
    Species: Staphylococcus aureus (strain N315) [TaxId:158879]
    Gene: gyrB, SA0005
    Database cross-references and differences (RAF-indexed):
    • Uniprot P66937 (Start-134)
      • linker (135)
      • linker (136)
    • Uniprot P66937 (137-End)
  • Chain 'E':
    Compound: DNA (5'-d(*gp*ap*gp*ap*gp*tp*ap*t*gp*gp*cp*cp*ap*tp*ap*cp*tp*cp*tp*t)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'F':
    Compound: DNA (5'-d(*gp*ap*gp*ap*gp*tp*ap*t*gp*gp*cp*cp*ap*tp*ap*cp*tp*cp*tp*t)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: MN, NA, GOL, SO4, E3E, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fqsA (A:)
aelpqsrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpd
ksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaam
rytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgiavgmat
nipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsi
qmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtg
vrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqkt
vvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekq
aqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfg
ddrrteiqlg

    Sequence, based on observed residues (ATOM records):
    >6fqsA (A:)
nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksar
ivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmt
kitlellrdinkdtidfidnydgnerepsvlparfpnllangasgiavgmatnipphnlt
elingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravi
eergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvr
kdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqy
nlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmr
lrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiq
l

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fqsB (B:)
mdvaslpgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgkilnvekar
ldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfm
rplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlm
gdvvenrrqfiednavyanldf

    Sequence, based on observed residues (ATOM records):
    >6fqsB (B:)
kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgkilnvekarldrilnnn
eirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagy
vyiaqpptykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrq
fiednavya

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6fqsC (C:)
aelpqsrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpd
ksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaam
rytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgiavgmat
nipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsi
qmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtg
vrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqkt
vvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekq
aqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfg
ddrrteiqlg

    Sequence, based on observed residues (ATOM records):
    >6fqsC (C:)
nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksar
ivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmt
kitlellrdinkdtidfidnydgnerepsvlparfpnllangasgiavgmatnipphnlt
elingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravi
eergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvr
kdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqy
nlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmr
lrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiq
l

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6fqsD (D:)
mdvaslpgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgkilnvekar
ldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfm
rplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlm
gdvvenrrqfiednavyanldf

    Sequence, based on observed residues (ATOM records):
    >6fqsD (D:)
kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgkilnvekarldrilnnn
eirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagy
vyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrr
qfiednavy

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.