PDB entry 6fpt

View 6fpt on RCSB PDB site
Description: crystal structure of danio rerio lin41 filamin-nhl domains
Deposited on 2018-02-12, released 2018-05-09
The last revision was dated 2018-05-09, with a file datestamp of 2018-05-04.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase TRIM71
    Species: Danio rerio [TaxId:7955]
    Gene: trim71, lin41
    Database cross-references and differences (RAF-indexed):
    • Uniprot E7FAM5 (19-408)
      • expression tag (18)
  • Chain 'B':
    Compound: E3 ubiquitin-protein ligase TRIM71
    Species: Danio rerio [TaxId:7955]
    Gene: trim71, lin41
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fptA (A:)
mahhhhhhssglevlfqgpssgafataskahgegikralqgkpasftvvgydhdgeprls
ggdsvsvvlmspdgnlssaevsdhqdgtytvsylpkgegehllsvlicnqhiegspfkvm
vksgrsyggvglpmasfggegdgdgqlcrpwgicvdkegyvvvadrsnnrvqifkpcgtf
hhkfgtlgsrpgqfdrpagvacdsqrriivadkdnhriqiftfdgqfllkfgekgtkngq
fnypwdvavnfegkilvsdtrnhrvqlfgpdgtflnkygfegalwkhfdsprgvafnqeg
hlvvtdfnnhrllvirpdcqsarflgsegtgngqflrpqgvavdqedriivadsrnhriq
vfepngnflckfgthgngfgqmdrpsgiavtpdgvivavdfgnnrilmf

    Sequence, based on observed residues (ATOM records):
    >6fptA (A:)
pssgafataskahgegikralqgkpasftvvgydhdgeprlsggdsvsvvlmspdgnlss
aevsdhqdgtytvsylpkgegehllsvlicnqhiegspfkvmvksgrsyggvglpmasfg
gegdgdgqlcrpwgicvdkegyvvvadrsnnrvqifkpcgtfhhkfgtlgsrpgqfdrpa
gvacdsqrriivadkdnhriqiftfdgqfllkfgekgtkngqfnypwdvavnfegkilvs
dtrnhrvqlfgpdgtflnkygfegalwkhfdsprgvafnqeghlvvtdfnnhrllvirpd
cqsarflgsegtgngqflrpqgvavdqedriivadsrnhriqvfepngnflckfgthgng
fgqmdrpsgiavtpdgvivavdfgnnrilmf

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fptB (B:)
mahhhhhhssglevlfqgpssgafataskahgegikralqgkpasftvvgydhdgeprls
ggdsvsvvlmspdgnlssaevsdhqdgtytvsylpkgegehllsvlicnqhiegspfkvm
vksgrsyggvglpmasfggegdgdgqlcrpwgicvdkegyvvvadrsnnrvqifkpcgtf
hhkfgtlgsrpgqfdrpagvacdsqrriivadkdnhriqiftfdgqfllkfgekgtkngq
fnypwdvavnfegkilvsdtrnhrvqlfgpdgtflnkygfegalwkhfdsprgvafnqeg
hlvvtdfnnhrllvirpdcqsarflgsegtgngqflrpqgvavdqedriivadsrnhriq
vfepngnflckfgthgngfgqmdrpsgiavtpdgvivavdfgnnrilmf

    Sequence, based on observed residues (ATOM records):
    >6fptB (B:)
ssgafataskahgegikralqgkpasftvvgydhdgeprlsggdsvsvvlmspdgnlssa
evsdhqdgtytvsylpkgegehllsvlicnqhiegspfkvmvkssyggvglpmasfggeg
dgdgqlcrpwgicvdkegyvvvadrsnnrvqifkpcgtfhhkfgtlgsrpgqfdrpagva
cdsqrriivadkdnhriqiftfdgqfllkfgekgtkngqfnypwdvavnfegkilvsdtr
nhrvqlfgpdgtflnkygfegalwkhfdsprgvafnqeghlvvtdfnnhrllvirpdcqs
arflgsegtgngqflrpqgvavdqedriivadsrnhriqvfepngnflckfgthgngfgq
mdrpsgiavtpdgvivavdfgnnrilmf