PDB entry 6fpe

View 6fpe on RCSB PDB site
Description: bacterial protein complex
Deposited on 2018-02-09, released 2018-05-23
Made obsolete by 6s84 on 2019-07-17

The last revision was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 3.14 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA threonylcarbamoyladenosine biosynthesis protein tsab
    Species: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) [TaxId:243274]
    Gene: tsaB, TM_0874, Tmari_0876
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: tRNA N6-adenosine threonylcarbamoyltransferase
    Species: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) [TaxId:243274]
    Gene: tsaD, gcp, TM_0145
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: tRNA threonylcarbamoyladenosine biosynthesis protein tsab
    Species: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) [TaxId:243274]
    Gene: tsaB, TM_0874, Tmari_0876
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: ATPase YjeE, predicted to have essential role in cell wall biosynthesis
    Species: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) [TaxId:243274]
    Gene: Tmari_1641
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: ATPase YjeE, predicted to have essential role in cell wall biosynthesis
    Species: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) [TaxId:243274]
    Gene: Tmari_1641
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: tRNA N6-adenosine threonylcarbamoyltransferase
    Species: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) [TaxId:243274]
    Gene: tsaD, gcp, TM_0145
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GOL, PEG, MG, APC

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fpeA (A:)
mnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldeldlkvkdldvvgv
gigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvlvarrarkgyhyc
avylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlveeserlfrekkt
ihyyeieplylqksiaelnwekkkrg

    Sequence, based on observed residues (ATOM records):
    >6fpeA (A:)
mnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldeldlkvkdldvvgv
gigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvlvarrarkgyhyc
avylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlveeserlfrekkt
ihyyeieplylqk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fpeB (B:)
mrvlgietscdetavavlddgknvvvnftvsqievhqkfggvvpevaarhhlknlpillk
kafekvppetvdvvaatygpgligallvglsaakglaislekpfvgvnhveahvqavfla
npdlkpplvvlmvsgghtqlmkvdedysmevlgetlddsageafdkvarllglgypggpv
idrvakkgdpekysfprpmldddsynfsfaglktsvlyflqrekgykvedvaasfqkavv
dilvektfrlarnlgirkiafvggvaansmlreevrkraerwnyevffpplelctdnalm
vakagyekakrgmfsplslnadpnlnv

    Sequence, based on observed residues (ATOM records):
    >6fpeB (B:)
mrvlgietscdetavavlddgknvvvnftvsrhhlknlpillkkafekvppetvdvvaat
ygpgligallvglsaakglaislekpfvgvnhveahvqavflanpdlkpplvvlmvsggh
tqlmkvdedysmevlgetlddsageafdkvarllglgypggpvidrvakkgdpekysfpr
pmldddsynfsfaglktsvlyflqrekgykvedvaasfqkavvdilvektfrlarnlgir
kiafvggvaansmlreevrkraerwnyevffpplelctdnalmvakagyekakrgmfspl
slnadpnl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6fpeC (C:)
mnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldeldlkvkdldvvgv
gigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvlvarrarkgyhyc
avylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlveeserlfrekkt
ihyyeieplylqksiaelnwekkkrg

    Sequence, based on observed residues (ATOM records):
    >6fpeC (C:)
mnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldeldlkvkdldvvgv
gigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvlvarrarkgyhyc
avylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlveeserlfrekkt
ihyyeieplylqksiaelnwekkkr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6fpeD (D:)
mghhhhhhenlyfqgyntveeqkmrhlrfenlteeqlkrlakiltenlkggevvilsgnl
gagkttfvkgmiraigldekmvksptftlmnvypglktiyhldlyrlqdtdflsldvedi
lededgimvvewgdlfdgfwpedsikvkieiadeshrnveilipeevnflvekieryrke
lqnt

    Sequence, based on observed residues (ATOM records):
    >6fpeD (D:)
mrhlrfenlteeqlkrlakiltenlkggevvilsgnlgagkttfvkgmiraigldekmvk
sptftlmnvypglktiyhldlyrlqdtdflsldvedilededgimvvewgdlfdgfwped
sikvkieiadeshrnveilipeevnflvekieryrke

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6fpeE (E:)
mghhhhhhenlyfqgyntveeqkmrhlrfenlteeqlkrlakiltenlkggevvilsgnl
gagkttfvkgmiraigldekmvksptftlmnvypglktiyhldlyrlqdtdflsldvedi
lededgimvvewgdlfdgfwpedsikvkieiadeshrnveilipeevnflvekieryrke
lqnt

    Sequence, based on observed residues (ATOM records):
    >6fpeE (E:)
mrhlrfenlteeqlkrlakiltenlkggevvilsgnlgagkttfvkgmiraigldekmvk
sptftlmnvypglktiyhldlyrlqdtdflsldvedilededgimvvewgdlfdgfwped
sikvkieiadeshrnveilipeevnflvekieryrke

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6fpeG (G:)
mrvlgietscdetavavlddgknvvvnftvsqievhqkfggvvpevaarhhlknlpillk
kafekvppetvdvvaatygpgligallvglsaakglaislekpfvgvnhveahvqavfla
npdlkpplvvlmvsgghtqlmkvdedysmevlgetlddsageafdkvarllglgypggpv
idrvakkgdpekysfprpmldddsynfsfaglktsvlyflqrekgykvedvaasfqkavv
dilvektfrlarnlgirkiafvggvaansmlreevrkraerwnyevffpplelctdnalm
vakagyekakrgmfsplslnadpnlnv

    Sequence, based on observed residues (ATOM records):
    >6fpeG (G:)
mrvlgietscdetavavlddgknvvvnftvsarhhlknlpillkkafekvppetvdvvaa
tygpgligallvglsaakglaislekpfvgvnhveahvqavflanpdlkpplvvlmvsgg
htqlmkvdedysmevlgetlddsageafdkvarllglgypggpvidrvakkgdpekysfp
rpmldddsynfsfaglktsvlyflqrekgykvedvaasfqkavvdilvektfrlarnlgi
rkiafvggvaansmlreevrkraerwnyevffpplelctdnalmvakagyekakrgmfsp
lslnadpnl