PDB entry 6foc

View 6foc on RCSB PDB site
Description: f1-atpase from mycobacterium smegmatis
Deposited on 2018-02-06, released 2019-01-23
The last revision was dated 2019-11-06, with a file datestamp of 2019-11-01.
Experiment type: XRAY
Resolution: 4 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP synthase subunit alpha,ATP synthase subunit alpha,ATP synthase subunit alpha
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: atpA, MSMEG_4938, MSMEI_4811
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R202 (Start-510)
    • PDB 6FOC
  • Chain 'B':
    Compound: ATP synthase subunit alpha,ATP synthase subunit alpha,ATP synthase subunit alpha
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: atpA, MSMEG_4938, MSMEI_4811
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R202 (Start-510)
    • PDB 6FOC
  • Chain 'C':
    Compound: ATP synthase subunit alpha,ATP synthase subunit alpha,ATP synthase subunit alpha
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: atpA, MSMEG_4938, MSMEI_4811
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R202 (Start-510)
    • PDB 6FOC
  • Chain 'D':
    Compound: ATP synthase subunit beta
    Species: Mycolicibacterium smegmatis MC2 155 [TaxId:246196]
    Gene: atpD, MSMEG_4936, MSMEI_4809
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: ATP synthase subunit beta
    Species: Mycolicibacterium smegmatis MC2 155 [TaxId:246196]
    Gene: atpD, MSMEG_4936, MSMEI_4809
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: ATP synthase subunit beta
    Species: Mycolicibacterium smegmatis MC2 155 [TaxId:246196]
    Gene: atpD, MSMEG_4936, MSMEI_4809
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: ATP synthase gamma chain
    Species: Mycolicibacterium smegmatis MC2 155 [TaxId:246196]
    Gene: atpG, MSMEG_4937, MSMEI_4810
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: ATP synthase epsilon chain
    Species: Mycolicibacterium smegmatis MC2 155 [TaxId:246196]
    Gene: atpC, MSMEG_4935, MSMEI_4808
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ADP, MG, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6focA (A:)
maeltisaadiegaiedyvssfsadtereeigtvidagdgiahveglpsvmtqellefpg
gvlgvalnldehsvgavilgefekieegqqvkrtgevlsvpvgdaflgrvvnplgqpidg
qgdiaaetrralelqapsvvqrqsvseplqtgikaidamtpigrgqrqliigdrktgkta
vcvdtilnqreawltgdpkqqvrcvyvaigqkgttiasvkraleeggameyttivaapas
daagfkwlapytgsaigqhwmyngkhvlivfddlskqadayraislllrrppgreafpgd
vfylhsrllercaklsdelgggsmtglpiietkandisafiptnvisitdgqcflesdlf
nqgvrpainvgvsvsrvggaaqikamkevagslrldlsqyreleafaafasdldaaskaq
ldrgarlvellkqpqysplaveeqvvaiflgtqghldsvpvedvqrfesellehvkashs
difdgiretkklseeaeeklvsvinefkkgfxxxxxxxxxxxenaealdpedlekesvkv
rkpapkka

    Sequence, based on observed residues (ATOM records):
    >6focA (A:)
igtvidagdgiahveglpsvmtqellefpggvlgvalnldehsvgavilgefekieegqq
vkrtgevlsvpvgdaflgrvvnplgqpidgqgdiaaetrralelqapsvvqrqsvseplq
tgikaidamtpigrgqrqliigdrktgktavcvdtilnqrvrcvyvaigqkgttiasvkr
aleeggameyttivaapasdaagfkwlapytgsaigqhwmyngkhvlivfddlskqaday
raislllrrppgreafpgdvfylhsrllercaklsdelgggsmtglpiietkandisafi
ptnvisitdgqcflesdlfnqgvrpainvgvsvsrvggaaqikamkevagslrldlsqyr
eleafaafasdldaaskaqldrgarlvellkqpqysplaveeqvvaiflgtqghldsvpv
edvqrfesellehvkashsdifdgiretkklseeaeeklvsvinefkkgfxxxxxxxxxx
x

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6focB (B:)
maeltisaadiegaiedyvssfsadtereeigtvidagdgiahveglpsvmtqellefpg
gvlgvalnldehsvgavilgefekieegqqvkrtgevlsvpvgdaflgrvvnplgqpidg
qgdiaaetrralelqapsvvqrqsvseplqtgikaidamtpigrgqrqliigdrktgkta
vcvdtilnqreawltgdpkqqvrcvyvaigqkgttiasvkraleeggameyttivaapas
daagfkwlapytgsaigqhwmyngkhvlivfddlskqadayraislllrrppgreafpgd
vfylhsrllercaklsdelgggsmtglpiietkandisafiptnvisitdgqcflesdlf
nqgvrpainvgvsvsrvggaaqikamkevagslrldlsqyreleafaafasdldaaskaq
ldrgarlvellkqpqysplaveeqvvaiflgtqghldsvpvedvqrfesellehvkashs
difdgiretkklseeaeeklvsvinefkkgfxxxxxxxxxxxenaealdpedlekesvkv
rkpapkka

    Sequence, based on observed residues (ATOM records):
    >6focB (B:)
eigtvidagdgiahveglpsvmtqellefpggvlgvalnldehsvgavilgefekieegq
qvkrtgevlsvpvgdaflgrvvnplgqpidgqgdiaaetrralelqapsvvqrqsvsepl
qtgikaidamtpigrgqrqliigdrktgktavcvdtilnqrvrcvyvaigqkgttiasvk
raleeggameyttivaapasdaagfkwlapytgsaigqhwmyngkhvlivfddlskqada
yraislllrrppgreafpgdvfylhsrllercaklsdelgggsmtglpiietkandisaf
iptnvisitdgqcflesdlfnqgvrpainvgvsvsrvggaaqikamkevagslrldlsqy
releafdaaskaqldrgarlvellkqpqysplaveeqvvaiflgtqghldsvpvedvqrf
esellehvkashsdifdgiretkklseeaeeklvsvinefkkgf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6focC (C:)
maeltisaadiegaiedyvssfsadtereeigtvidagdgiahveglpsvmtqellefpg
gvlgvalnldehsvgavilgefekieegqqvkrtgevlsvpvgdaflgrvvnplgqpidg
qgdiaaetrralelqapsvvqrqsvseplqtgikaidamtpigrgqrqliigdrktgkta
vcvdtilnqreawltgdpkqqvrcvyvaigqkgttiasvkraleeggameyttivaapas
daagfkwlapytgsaigqhwmyngkhvlivfddlskqadayraislllrrppgreafpgd
vfylhsrllercaklsdelgggsmtglpiietkandisafiptnvisitdgqcflesdlf
nqgvrpainvgvsvsrvggaaqikamkevagslrldlsqyreleafaafasdldaaskaq
ldrgarlvellkqpqysplaveeqvvaiflgtqghldsvpvedvqrfesellehvkashs
difdgiretkklseeaeeklvsvinefkkgfxxxxxxxxxxxenaealdpedlekesvkv
rkpapkka

    Sequence, based on observed residues (ATOM records):
    >6focC (C:)
eigtvidagdgiahveglpsvmtqellefpggvlgvalnldehsvgavilgefekieegq
qvkrtgevlsvpvgdaflgrvvnplgqpidgqgdiaaetrralelqapsvvqrqsvsepl
qtgikaidamtpigrgqrqliigdrktgktavcvdtilnqrvrcvyvaigqkgttiasvk
raleeggameyttivaapasdaagfkwlapytgsaigqhwmyngkhvlivfddlskqada
yraislllrrppgreafpgdvfylhsrllercaklsdelgggsmtglpiietkandisaf
iptnvisitdgqcflesdlfnqgvrpainvgvsvsrvggaaqikamkevagslrldlsqy
releafaafdldaaskaqldrgarlvellkqpqysplaveeqvvaiflgtqghldsvpve
dvqrfesellehvkashsdifdgiretkklseeaeeklvsvinefkkgf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6focD (D:)
mtataektagrvvritgpvvdvefprgsvpelfnalhaeitfgalaktltlevaqhlgds
lvrcismqptdglvrgvevtdtgasisvpvgdgvkghvfnalgdclddpgygkdfehwsi
hrkppafsdleprtemletglkvvdlltpyvrggkialfggagvgktvliqeminriarn
fggtsvfagvgertregndlwveladanvlkdtalvfgqmdeppgtrmrvalsaltmaef
frdeqgqdvllfidnifrftqagsevstllgrmpsavgyqptlademgelqeritstrgr
sitsmqavyvpaddytdpapattfahldattelsravfskgifpavdplassstildpai
vgdehyrvaqevirilqrykdlqdiiailgidelseedkqlvnrarrierflsqnmmaae
qftgqpgstvplketieafdkltkgefdhlpeqaffligglddlakkaeslgakl

    Sequence, based on observed residues (ATOM records):
    >6focD (D:)
agrvvritgpvvdvefprgsvpelfnalhaeitktltlevaqhlgdslvrcismqptdgl
vrgvevtdtgasisvpvgdgvkghvfnalgdclddehwsihrkppafsdleprtemletg
lkvvdlltpyvrggkialfggagvgktvliqeminriarnfggtsvfagvgertregndl
wveladanvlkdtalvfgqmdeppgtrmrvalsaltmaeffrdeqgqdvllfidnifrft
qagsevstllgrmpsavgyqptlademgelqeritstrgrsitsmqavyvpaddytdpap
attfahldattelsravfskgifpavdplassstildpaivgdehyrvaqevirilqryk
dlqdiiailgidelseedkqlvnrarrierflsqnmmaaeqftgqpgstvplketieafd
kltkgefdhlpeqaffligglddlakkaesl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6focE (E:)
mtataektagrvvritgpvvdvefprgsvpelfnalhaeitfgalaktltlevaqhlgds
lvrcismqptdglvrgvevtdtgasisvpvgdgvkghvfnalgdclddpgygkdfehwsi
hrkppafsdleprtemletglkvvdlltpyvrggkialfggagvgktvliqeminriarn
fggtsvfagvgertregndlwveladanvlkdtalvfgqmdeppgtrmrvalsaltmaef
frdeqgqdvllfidnifrftqagsevstllgrmpsavgyqptlademgelqeritstrgr
sitsmqavyvpaddytdpapattfahldattelsravfskgifpavdplassstildpai
vgdehyrvaqevirilqrykdlqdiiailgidelseedkqlvnrarrierflsqnmmaae
qftgqpgstvplketieafdkltkgefdhlpeqaffligglddlakkaeslgakl

    Sequence, based on observed residues (ATOM records):
    >6focE (E:)
agrvvritgpvvdvefprgsvpelfnalhaeitktltlevaqhlgdslvrcismqptdgl
vrgvevtdtgasisvpvgdgvkghvfnalgdclddehwsihrkppafsdlepmletglkv
vdlltpyvrggkialfggagvgktvliqeminriarnfggtsvfagvgertregndlwve
ladanvlkdtalvfgqmdeppgtrmrvalsaltmaeffrdeqgqdvllfidnifrftqag
sevstllgrmpsavgyqptlademgelqeritstrgrsitsmqavyvpaddytdpapatt
fahldattelsravfskgifpavdplassstildpaivgdehyrvaqevirilqrykdlq
diiailgidelseedkqlvnrarrierflsqnmmaaeqftgqpgstvplketieafdklt
kgefdhlpeqaffligglddlakkaesl

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6focF (F:)
mtataektagrvvritgpvvdvefprgsvpelfnalhaeitfgalaktltlevaqhlgds
lvrcismqptdglvrgvevtdtgasisvpvgdgvkghvfnalgdclddpgygkdfehwsi
hrkppafsdleprtemletglkvvdlltpyvrggkialfggagvgktvliqeminriarn
fggtsvfagvgertregndlwveladanvlkdtalvfgqmdeppgtrmrvalsaltmaef
frdeqgqdvllfidnifrftqagsevstllgrmpsavgyqptlademgelqeritstrgr
sitsmqavyvpaddytdpapattfahldattelsravfskgifpavdplassstildpai
vgdehyrvaqevirilqrykdlqdiiailgidelseedkqlvnrarrierflsqnmmaae
qftgqpgstvplketieafdkltkgefdhlpeqaffligglddlakkaeslgakl

    Sequence, based on observed residues (ATOM records):
    >6focF (F:)
tagrvvritgpvvdvefprgsvpelfnalhaeitktltlevaqhlgdslvrcismqptdg
lvrgvevtdtgasisvpvgdgvkghvfnalgdcldddfehwsihrkppafsdleprteml
etglkvvdlltpyvrggkialfggagvgktvliqeminriarnfggtsvfagvgertreg
ndlwveladanvlkdtalvfgqmdeppgtrmrvalsaltmaeffrdeqgqdvllfidnif
rftqagsevstllgrmpsavgyqptlademgelqeritstrgrsitsmqavyvpaddytd
papattfahldattelsravfskgifpavdplassstildpaivgdehyrvaqevirilq
rykdlqdiiailgidelseedkqlvnrarrierflsqnmmaaeqftgqpgstvplketie
afdkltkgefdhlpeqaffligglddlakkaesl

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6focG (G:)
maatlrelrgrirsagsikkitkaqeliatsriakaqarveaarpyaaeitnmltelaga
saldhpllverkqpkragvlvvssdrglcgaynanvlrraeelfsllrdegkdpvlyvvg
rkalgyfsfrqrtvveswtgfserptyenareiadtlvnafmagaddegddagadgilgv
delhivftefrsmlsqtavarraapmeveyvgevetgprtlysfepdpetlfdallpryi
atrvyaalleaaasesasrrramksatdnaddlikaltlaanrerqaqitqeiseivgga
nalagsk

    Sequence, based on observed residues (ATOM records):
    >6focG (G:)
tlrelrgrirsagsikkitkaqeliatsriakaqarveaarpyaaeitnmltelsdrglc
gaynanvlrraeelfsllrvgrkalgyfsftgfserptyenareiadtlvnafmatefrs
mlsqtaryiatrvyaalleaaasesasrrramksatdnaddlikaltlaanrerqaqitq
eiseivgganala

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6focH (H:)
madlnveivaverelwsgpatfvftrttageigilprhiplvaqlvddamvrveregedd
lriavdggflsvteetvrilvenaqfeseidadaakedaasddertaawgrarlralgqi
d

    Sequence, based on observed residues (ATOM records):
    >6focH (H:)
dlnveivaverelwsgpatfvftrttageigilprhiplvaqlvddamvrveregeddlr
iavdggflsvteetvrilvenaqfeseidadaakedaasddertaawgrarlr