PDB entry 6fnd

View 6fnd on RCSB PDB site
Description: crystal structure of toxoplasma gondii akmt
Deposited on 2018-02-02, released 2018-11-14
The last revision was dated 2018-11-14, with a file datestamp of 2018-11-09.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Apical complex lysine methyltransferase
    Species: Toxoplasma gondii [TaxId:5811]
    Gene: TGPRC2_216080B
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Apical complex lysine methyltransferase
    Species: Toxoplasma gondii TgCatPRC2 [TaxId:1130821]
    Gene: TGPRC2_216080B
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Apical complex lysine methyltransferase
    Species: Toxoplasma gondii TgCatPRC2 [TaxId:1130821]
    Gene: TGPRC2_216080B
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Apical complex lysine methyltransferase
    Species: Toxoplasma gondii TgCatPRC2 [TaxId:1130821]
    Gene: TGPRC2_216080B
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, SO4, GOL, EDO, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6fndA (A:)
    gshmanplapytlpqiatkvqvkhvpgkgrclytkhdlepgsiifvetpvlvaipsldee
    lwsvlteindeealelppvwhlaaicsltmlddekkkicldkwvpdpdrapsddvlrvin
    raglqvhpklyermlmvwrynsfghhteqhglvlynrismmahscratacwhygeddafi
    lrarvklqagdeltisyigdddlfkstnvrrekvygwlftcqcvrcaapvdnargfrcpl
    cgtgamffktedgettssacticqafptqetiqeyldfeqayvdrlaetdksdvpdaelv
    ynqatrvfaqhwvlyqlhtilfegyrdagnsesasfhqmerikyvsqvmplasytlawly
    eemgdtmlnkaeesgpevpahklnvisrhfedaynllyilcgedhdytvaagtkktacee
    rlp
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6fndB (B:)
    lapytlpqiatkvqvkhvpgkgrclytkhdlepgsiifvetpvlvaipsldeelwsvlte
    indeealelppvwhlaaicsltmlddekkkicldkwvpdpdrapsddvlrvinraglqvh
    pklyermlmvwrynsfghhteqhglvlynrismmahscratacwhygeddafilrarvkl
    qagdeltisyigdddlfkstnvrrekvygwlftcqcvrcaapvdnargfrcplcgtgamf
    fktedgettssacticqafptqetiqeyldfeqayvdrlaetdksdvpdaelvynqatrv
    faqhwvlyqlhtilfegyrdagnsesasfhqmerikyvsqvmplasytlawlyeemgdtm
    lnkaeesgpevpahklnvisrhfedaynllyilcgedhdytvaagtkktaceerlpas
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6fndC (C:)
    gshmanplapytlpqiatkvqvkhvpgkgrclytkhdlepgsiifvetpvlvaipsldee
    lwsvlteindeealelppvwhlaaicsltmlddekkkicldkwvpdpdrapsddvlrvin
    raglqvhpklyermlmvwrynsfghhteqhglvlynrismmahscratacwhygeddafi
    lrarvklqagdeltisyigdddlfkstnvrrekvygwlftcqcvrcaapvdnargfrcpl
    cgtgamffktedgettssacticqafptqetiqeyldfeqayvdrlaetdksdvpdaelv
    ynqatrvfaqhwvlyqlhtilfegyrdagnsesasfhqmerikyvsqvmplasytlawly
    eemgdtmlnkaeesgpevpahklnvisrhfedaynllyilcgedhdytvaagtkktacee
    rlpa
    

    Sequence, based on observed residues (ATOM records):
    >6fndC (C:)
    anplapytlpqiatkvqvkhvpgkgrclytkhdlepgsiifvetpvlvaipsldeelwsv
    lteindeealelppvwhlaaicsltmlddekkkicldkwvpdpdrapsddvlrvinragl
    qvhpklyermlmvwrynsfghhteqhglvlynrismmahscratacwhygeddafilrar
    vklqagdeltisyigdddlfkstnvrrekvygwlftcqcvrcaapvdnargfrcplcgtg
    amffktedgettssacticqafptqetiqeyldfeqayvdrlaetdksdvpdaelvynqa
    trvfaqhwvlyqlhtilfegyrdagnsesasfhqmerikyvsqvmplasytlawlyeemg
    dtmlnkaeesgpevpahklnvisrhfedaynllyilcgedhdytvaagtkktaceerlpa
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6fndD (D:)
    gshmanplapytlpqiatkvqvkhvpgkgrclytkhdlepgsiifvetpvlvaipsldee
    lwsvlteindeealelppvwhlaaicsltmlddekkkicldkwvpdpdrapsddvlrvin
    raglqvhpklyermlmvwrynsfghhteqhglvlynrismmahscratacwhygeddafi
    lrarvklqagdeltisyigdddlfkstnvrrekvygwlftcqcvrcaapvdnargfrcpl
    cgtgamffktedgettssacticqafptqetiqeyldfeqayvdrlaetdksdvpdaelv
    ynqatrvfaqhwvlyqlhtilfegyrdagnsesasfhqmerikyvsqvmplasytlawly
    eemgdtmlnkaeesgpevpahklnvisrhfedaynllyilcgedhdytvaagtkktacee
    rlpas
    

    Sequence, based on observed residues (ATOM records):
    >6fndD (D:)
    manplapytlpqiatkvqvkhvpgkgrclytkhdlepgsiifvetpvlvaipsldeelws
    vlteindeealelppvwhlaaicsltmlddekkkicldkwvpdpdrapsddvlrvinrag
    lqvhpklyermlmvwrynsfghhteqhglvlynrismmahscratacwhygeddafilra
    rvklqagdeltisyigdddlfkstnvrrekvygwlftcqcvrcaapvdnargfrcplcgt
    gamffktedgettssacticqafptqetiqeyldfeqayvdrlaetdksdvpdaelvynq
    atrvfaqhwvlyqlhtilfegyrdagnsesasfhqmerikyvsqvmplasytlawlyeem
    gdtmlnkaeesgpevpahklnvisrhfedaynllyilcgedhdytvaagtkktaceerlp
    as