PDB entry 6fln

View 6fln on RCSB PDB site
Description: crystal structure of the human trim25 coiled-coil and pryspry domains
Deposited on 2018-01-26, released 2018-05-23
The last revision was dated 2018-05-23, with a file datestamp of 2018-05-18.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: e3 ubiquitin/isg15 ligase trim25
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM25, EFP, RNF147, ZNF147
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: e3 ubiquitin/isg15 ligase trim25
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM25, EFP, RNF147, ZNF147
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14258 (3-End)
      • expression tag (2)
  • Chain 'E':
    Compound: e3 ubiquitin/isg15 ligase trim25
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM25, EFP, RNF147, ZNF147
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6flnA (A:)
gamaslsqasadleatlrhkltvmysqingasralddvrnrqqdvrmtanrkveqlqqey
temkalldasettstrkikeeekrvnskfdtiyqillkkkseiqtlkeeieqsltkrdef
eflekasklrgistkpvyipevelnhklikgihqstidlknelkqcigrlqeptpssgdp
gehdpasthkstrpvkkvskeekkskkpppvpalpsklptfgapeqlvdlkqagleaaak
atsshpnstslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaemp
qnyrphpqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrn
saswcvewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrv
dftealypafwvfsagatlsicspk

    Sequence, based on observed residues (ATOM records):
    >6flnA (A:)
aslsqasadleatlrhkltvmysqingasralddvrnrqqdvrmtanrkveqlqqeytem
kalldasettstrkikeeekrvnskfdtiyqillkkkseiqtlkeeieqsltkrdefefl
ekasklrgistkpvyipevelnhklikgihqstidlknelkqcigrlqeptplkakvlet
flaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrphpqrftycsqvlg
lhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcvewfntkisawhn
nvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdftealypafwvfsagat
lsicsp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6flnB (B:)
gamaslsqasadleatlrhkltvmysqingasralddvrnrqqdvrmtanrkveqlqqey
temkalldasettstrkikeeekrvnskfdtiyqillkkkseiqtlkeeieqsltkrdef
eflekasklrgistkpvyipevelnhklikgihqstidlknelkqcigrlqeptpssgdp
gehdpasthkstrpvkkvskeekkskkpppvpalpsklptfgapeqlvdlkqagleaaak
atsshpnstslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaemp
qnyrphpqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrn
saswcvewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrv
dftealypafwvfsagatlsicspk

    Sequence, based on observed residues (ATOM records):
    >6flnB (B:)
maslsqasadleatlrhkltvmysqingasralddvrnrqqdvrmtanrkveqlqqeyte
mkalldasettstrkikeeekrvnskfdtiyqillkkkseiqtlkeeieqsltkrdefef
lekasklrgistkpvyipevelnhklikgihqstidlknelkqcigrlqeptslkakvle
tflaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrphpqrftycsqvl
glhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcvewfntkisawh
nnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdftealypafwvfsaga
tlsicsp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6flnE (E:)
gamaslsqasadleatlrhkltvmysqingasralddvrnrqqdvrmtanrkveqlqqey
temkalldasettstrkikeeekrvnskfdtiyqillkkkseiqtlkeeieqsltkrdef
eflekasklrgistkpvyipevelnhklikgihqstidlknelkqcigrlqeptpssgdp
gehdpasthkstrpvkkvskeekkskkpppvpalpsklptfgapeqlvdlkqagleaaak
atsshpnstslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaemp
qnyrphpqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrn
saswcvewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrv
dftealypafwvfsagatlsicspk

    Sequence, based on observed residues (ATOM records):
    >6flnE (E:)
aslsqasadleatlrhkltvmysqingasralddvrnrqqdvrmtanrkveqlqqeytem
kalldasettstrkikeeekrvnskfdtiyqillkkkseiqtlkeeieqsltkrdefefl
ekasklrgistkpvyipevelnhklikgihqstidlknelkqcigrlqtslkakvletfl
aksrpelleyyikvildyntahnkvalsecytvasvaempqnyrphpqrftycsqvlglh
cykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcvewfntkisawhnnv
ektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdftealypafwvfsagatls
icsp