PDB entry 6flm

View 6flm on RCSB PDB site
Description: crystal structure of the human trim25 pryspry domain
Deposited on 2018-01-26, released 2018-05-23
The last revision was dated 2018-05-23, with a file datestamp of 2018-05-18.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: e3 ubiquitin/isg15 ligase trim25
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM25, EFP, RNF147, ZNF147
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14258 (3-End)
      • expression tag (0-2)
  • Chain 'B':
    Compound: e3 ubiquitin/isg15 ligase trim25
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM25, EFP, RNF147, ZNF147
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14258 (3-End)
      • expression tag (0-2)
  • Chain 'C':
    Compound: e3 ubiquitin/isg15 ligase trim25
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM25, EFP, RNF147, ZNF147
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q14258 (3-198)
      • expression tag (0-2)
  • Heterogens: SO4, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6flmA (A:)
gmaslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrph
pqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcv
ewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdfteal
ypafwvfsagatlsicspk

    Sequence, based on observed residues (ATOM records):
    >6flmA (A:)
gmaslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrph
pqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcv
ewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdfteal
ypafwvfsagatlsicsp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6flmB (B:)
gmaslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrph
pqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcv
ewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdfteal
ypafwvfsagatlsicspk

    Sequence, based on observed residues (ATOM records):
    >6flmB (B:)
gmaslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrph
pqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcv
ewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdfteal
ypafwvfsagatlsicsp

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6flmC (C:)
gmaslkakvletflaksrpelleyyikvildyntahnkvalsecytvasvaempqnyrph
pqrftycsqvlglhcykkgihywevelqknnfcgvgicygsmnrqgpesrlgrnsaswcv
ewfntkisawhnnvektlpstkatrvgvllncdhgfviffavadkvhlmykfrvdfteal
ypafwvfsagatlsicspk