PDB entry 6fla

View 6fla on RCSB PDB site
Description: 3H5 Fab bound to EDIII of DenV 2 Xtal form 1
Class: viral protein
Keywords: Dengue virus, antibody, macromolecular complex, VIRAL PROTEIN
Deposited on 2018-01-25, released 2018-10-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-03, with a file datestamp of 2019-03-29.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FLA (0-End)
    Domains in SCOPe 2.08: d6flaa1, d6flaa2
  • Chain 'B':
    Compound: Light Chain of 3H5
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FLA (0-End)
    Domains in SCOPe 2.08: d6flab1, d6flab2
  • Chain 'G':
    Compound: Domain III of Dengue virus 2
    Species: Dengue virus 2 [TaxId:11060]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6flag_
  • Chain 'H':
    Compound: heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FLA (0-End)
    Domains in SCOPe 2.08: d6flah1, d6flah2
  • Chain 'I':
    Compound: Domain III of Dengue virus 2
    Species: Dengue virus 2 [TaxId:11060]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6flai_
  • Chain 'L':
    Compound: Light Chain of 3H5
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FLA (0-End)
    Domains in SCOPe 2.08: d6flal1, d6flal2
  • Heterogens: CL, GOL

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6flaA (A:)
qvqlqqsgaevarpgasvklsckasgytftsywlqwvkqrpgqglewigaiwpgdddtry
aqkfqgkatmtadkssstayiqlsnlasedsavyycarkggfamdywgqgtsvtvssakt
tppsvyplapgsgaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkieprdcgkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6flaA (A:)
qvqlqqsgaevarpgasvklsckasgytftsywlqwvkqrpgqglewigaiwpgdddtry
aqkfqgkatmtadkssstayiqlsnlasedsavyycarkggfamdywgqgtsvtvssakt
tppsvyplapgnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkiepr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6flaB (B:)
nivmtqsptslavslgqratiscrasesvdsfgksfmhfyqqkpgqppkllihlasnles
gvparftgrgsrtdftltidpveaddaatyycqqnnevpftfgsgtklevkradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records): (download) 
    >6flaB (B:)
nivmtqsptslavslgqratiscrasesvdsfgksfmhfyqqkpgqppkllihlasnles
gvparftgrgsrtdftltidpveaddaatyycqqnnevpftfgsgtklevkradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrn

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6flaG (G:)
msysmctgkfkvvkeiaetqhgtivirvqyegdgspckipfeimdlekrhvlgrlitvnp
ivtekdspvnieaeppfgdsyiiigvepgqlklnwfkk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6flaH (H:)
qvqlqqsgaevarpgasvklsckasgytftsywlqwvkqrpgqglewigaiwpgdddtry
aqkfqgkatmtadkssstayiqlsnlasedsavyycarkggfamdywgqgtsvtvssakt
tppsvyplapgsgaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkieprdcgkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6flaH (H:)
qvqlqqsgaevarpgasvklsckasgytftsywlqwvkqrpgqglewigaiwpgdddtry
aqkfqgkatmtadkssstayiqlsnlasedsavyycarkggfamdywgqgtsvtvssakt
tppsvyplapgsgaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkiepr

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6flaI (I:)
msysmctgkfkvvkeiaetqhgtivirvqyegdgspckipfeimdlekrhvlgrlitvnp
ivtekdspvnieaeppfgdsyiiigvepgqlklnwfkkgss

    Sequence, based on observed residues (ATOM records): (download) 
    >6flaI (I:)
ysmctgkfkvvkeiaetqhgtivirvqyegdgspckipfeimdlekrhvlgrlitvnpiv
tekdspvnieaeppfgdsyiiigvepgqlklnwfkkgss

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6flaL (L:)
nivmtqsptslavslgqratiscrasesvdsfgksfmhfyqqkpgqppkllihlasnles
gvparftgrgsrtdftltidpveaddaatyycqqnnevpftfgsgtklevkradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records): (download) 
    >6flaL (L:)
nivmtqsptslavslgqratiscrasesvdsfgksfmhfyqqkpgqppkllihlasnles
gvparftgrgsrtdftltidpveaddaatyycqqnnevpftfgsgtklevkradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrn