PDB entry 6fkk

View 6fkk on RCSB PDB site
Description: drosophila semaphorin 1b, extracellular domains 1-2
Deposited on 2018-01-24, released 2019-02-06
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.78 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MIP07328p
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Sema1b, Sema-1b, Sema-1b-RB, semaphorin-like, CG6446, Dmel_CG6446
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fkkA (A:)
    etgdvkpdlqtkqdkvlahfignstdyfkildhndefvlvgakdviynvslnglkeiarl
    ewhstdadrelcalkgkhewdchnylrvyalrpngevllcgtnsykprcrhytpvevsse
    eagsaghahamryevsrdveaqglcpyspahnstyafadghlysatvadfsggdpliyre
    nlrteqydlkqlnqpdfvgaierngyvlfffrelsmevmnfgkavysrvarvckndrggp
    yshgkswtsflkarlncsvpgefpfyfdeiqaispivesgsksliyavfttsvnaipgsa
    vcafnvddilaafdgefksqkdsqshwlpvereqvpkprpgqcvedsrtltsiavnfikn
    hplmeeavpavhgrplltkvnlhhrltaiavhpqvkslsgayydviysgtddgkvtkfin
    ilsthpnstvdrlktvvisemqvlplgtpirelvistsknslvvvsdgslvsvplhhcsh
    ivdclgclslqdpicawdlqthecknlatsqhkfgtktylqslnstkkaaallcphiprd
    apgaetvsfvtmapppteeqkllysnvgsgtkhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6fkkA (A:)
    lqtkqdkvlahfignstdyfkildhndefvlvgakdviynvslnglkeiarlewhstdad
    relcalkgkhewdchnylrvyalrpngevllcgtnsykprcrhythamryevsrdveaqg
    lcpyspahnstyafadghlysatvadfsggdpliyrenlrteqydlkqlnqpdfvgaier
    ngyvlfffrelsmevmnfgkavysrvarvckndrggpyshgkswtsflkarlncsvpgef
    pfyfdeiqaispivesgsksliyavfttsvnaipgsavcafnvddilaafdgefksqkds
    qshwlpvereqvpkprpgqcvedsrtltsiavnfiknhplmeeavpavhgrplltkvnlh
    hrltaiavhpqvkslsgayydviysgtddgkvtkfinilsthpnstvdrlktvvisemqv
    lplgtpirelvistsknslvvvsdgslvsvplhhcshivdclgclslqdpicawdlqthe
    cknlatsqhkfgtktylqslnstkkaaallcph