PDB entry 6fk9

View 6fk9 on RCSB PDB site
Description: Crystal structure of N2C/D282C stabilized opsin bound to RS09
Class: membrane protein
Keywords: rhodopsin, g protein-coupled receptors, retinitis pigmentosa, signaling protein, sensory transduction, photoreceptor protein, kintegral membrane protein, vision, membrane, receptor, transducer photoreceptor, small molecule complex, membrane protein
Deposited on 2018-01-23, released 2018-04-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-04-04, with a file datestamp of 2018-03-29.
Experiment type: XRAY
Resolution: 2.63 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rhodopsin
    Species: Bos taurus [TaxId:9913]
    Gene: RHO
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02699 (0-End)
      • conflict (1)
      • conflict (281)
    Domains in SCOPe 2.07: d6fk9a_
  • Heterogens: PLM, NAG, BMA, MAN, BOG, DNK, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6fk9A (A:)
    mcgtegpnfyvpfsnktgvvrspfeapqyylaepwqfsmlaaymfllimlgfpinfltly
    vtvqhkklrtplnyillnlavadlfmvfggftttlytslhgyfvfgptgcnlegffatlg
    geialwslvvlaieryvvvckpmsnfrfgenhaimgvaftwvmalacaapplvgwsryip
    egmqcscgidyytpheetnnesfviymfvvhfiipliviffcygqlvftvkeaaaqqqes
    attqkaekevtrmviimviaflicwlpyagvafyifthqgscfgpifmtipaffaktsav
    ynpviyimmnkqfrncmvttlccgknplgddeasttvsktetsqvapa
    

    Sequence, based on observed residues (ATOM records): (download)
    >6fk9A (A:)
    mcgtegpnfyvpfsnktgvvrspfeapqyylaepwqfsmlaaymfllimlgfpinfltly
    vtvqhkklrtplnyillnlavadlfmvfggftttlytslhgyfvfgptgcnlegffatlg
    geialwslvvlaieryvvvckpmsnfrfgenhaimgvaftwvmalacaapplvgwsryip
    egmqcscgidyytpheetnnesfviymfvvhfiipliviffcygqlvftvkeaaaqqqes
    attqkaekevtrmviimviaflicwlpyagvafyifthqgscfgpifmtipaffaktsav
    ynpviyimmnkqfrncmvttlccgkn