PDB entry 6fk4

View 6fk4 on RCSB PDB site
Description: structure of 3' phosphatase nexo (wt) from neisseria bound to dna substrate
Deposited on 2018-01-23, released 2018-10-31
The last revision was dated 2018-12-26, with a file datestamp of 2018-12-21.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exodeoxyribonuclease III
    Species: Neisseria meningitidis serogroup B (strain MC58) [TaxId:122586]
    Gene: xthA, NMB0399
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9K100 (2-257)
      • expression tag (1)
  • Chain 'B':
    Compound: DNA (5'-d(p*gp*cp*tp*ap*gp*cp*gp*ap*ap*gp*cp*tp*ap*gp*a)-3')
    Species: other sequences, synthetic [TaxId:28384]
  • Heterogens: MPD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fk4A (A:)
gamkittwnvnslnvrlpqvqnlladnppdilvlqelkldqdkfpaaalqmmgwhcvwsg
qktyngvaivsrsvpqdvhfglpalpddpqrrviaatvsgvrvinvycvngealdspkfk
ykeqwfaaltefvrdemtrhgklvllgdfniapadadcydpekwhekihcssverqwfqn
lldlgltdslrqvhpegafytwfdyrgamfqrklglridhilvspamaaalkdvrvdlet
ralerpsdhapvtaefdw

    Sequence, based on observed residues (ATOM records):
    >6fk4A (A:)
amkittwnvnslnvrlpqvqnlladnppdilvlqelkldqdkfpaaalqmmgwhcvwsgq
ktyngvaivsrsvpqdvhfglpalpddpqrrviaatvsgvrvinvycvngealdspkfky
keqwfaaltefvrdemtrhgklvllgdfniapadadcydpekwhekihcssverqwfqnl
ldlgltdslrqvhpegafytwfdyrgamfqrklglridhilvspamaaalkdvrvdletr
alerpsdhapvtaefdw

  • Chain 'B':
    No sequence available.