PDB entry 6fib

View 6fib on RCSB PDB site
Description: structure of human 4-1bb ligand
Deposited on 2018-01-17, released 2019-03-13
The last revision was dated 2019-06-26, with a file datestamp of 2019-06-21.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tumor necrosis factor ligand superfamily member 9
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFSF9
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Tumor necrosis factor ligand superfamily member 9,4-1BBL -CH/CL fusion
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFSF9
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Tumor necrosis factor ligand superfamily member 9,Uncharacterized protein
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFSF9
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fibA (A:)
regpelspddpaglldlrqgmfaqlvaqnvllidgplswysdpglagvsltgglsykedt
kelvvakagvyyvffqlelrrvvagegsgsvslalhlqplrsaagaaalaltvdlppass
earnsafgfqgrllhlsagqrlgvhlhteararhawqltqgatvlglfrvtpeipaglgg
ggsggggs

    Sequence, based on observed residues (ATOM records):
    >6fibA (A:)
mfaqlvaqnvllidgplswysdpglagvsltgglsykedtkelvvakagvyyvffqlelr
rvvagegsgsvslalhlqplaaalaltvdlppassearnsafgfqgrllhlsagqrlgvh
lhteararhawqltqgatvlglfrvt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fibB (B:)
regpelspddpaglldlrqgmfaqlvaqnvllidgplswysdpglagvsltgglsykedt
kelvvakagvyyvffqlelrrvvagegsgsvslalhlqplrsaagaaalaltvdlppass
earnsafgfqgrllhlsagqrlgvhlhteararhawqltqgatvlglfrvtpeipaglgg
ggsggggsrtvaapsvfifppsdrklksgtasvvcllnnfypreakvqwkvdnalqsgns
qesvteqdskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgecdktht
cppcpapellg

    Sequence, based on observed residues (ATOM records):
    >6fibB (B:)
mfaqlvaqnvllidgplswysdpglagvlsykedtkelvvakagvyyvffqlelrrvvag
egsgsvslalhlqpaaalaltvdlppassearnsafgfqgrllhlsagqrlgvhlhtear
arhawqltqgatvlglfrvt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6fibC (C:)
rregpelspddpaglldlrqgmfaqlvaqnvllidgplswysdpglagvsltgglsyked
tkelvvakagvyyvffqlelrrvvagegsgsvslalhlqplrsaagaaalaltvdlppas
searnsafgfqgrllhlsagqrlgvhlhteararhawqltqgatvlglfrvtpeipaglg
gggsggggsastkgpsvfplapsskstsggtaalgclvedyfpepvtvswnsgaltsgvh
tfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdekvepksc

    Sequence, based on observed residues (ATOM records):
    >6fibC (C:)
mfaqlvaqnvllidgplswysdpglagvlsykedtkelvvakagvyyvffqlelrrvvag
egsgsvslalhlqplrsaagaaalaltvdlppassearnsafgfqgrllhlsagqrlgvh
lhteararhawqltqgatvlglfrvt