PDB entry 6fia

View 6fia on RCSB PDB site
Description: structure of the human line-1 orf1p coiled coil domain
Deposited on 2018-01-17, released 2018-03-28
The last revision was dated 2018-04-18, with a file datestamp of 2018-04-13.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LINE-1 retrotransposable element ORF1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L1RE1, LRE1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UN81 (4-103)
      • expression tag (1-3)
      • engineered mutation (72)
      • engineered mutation (76)
      • engineered mutation (79)
  • Chain 'B':
    Compound: LINE-1 retrotransposable element ORF1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L1RE1, LRE1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UN81 (4-103)
      • engineered mutation (72)
      • engineered mutation (76)
      • engineered mutation (79)
  • Chain 'C':
    Compound: LINE-1 retrotransposable element ORF1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L1RE1, LRE1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UN81
      • engineered mutation (72)
      • engineered mutation (76)
      • engineered mutation (79)
  • Chain 'D':
    Compound: LINE-1 retrotransposable element ORF1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L1RE1, LRE1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UN81 (4-103)
      • expression tag (0-3)
      • engineered mutation (72)
      • engineered mutation (76)
      • engineered mutation (79)
  • Chain 'E':
    Compound: LINE-1 retrotransposable element ORF1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L1RE1, LRE1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UN81 (Start-103)
      • engineered mutation (72)
      • engineered mutation (76)
      • engineered mutation (79)
  • Chain 'F':
    Compound: LINE-1 retrotransposable element ORF1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L1RE1, LRE1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UN81 (Start-103)
      • engineered mutation (72)
      • engineered mutation (76)
      • engineered mutation (79)
  • Heterogens: CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fiaA (A:)
gphmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslr
srcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

    Sequence, based on observed residues (ATOM records):
    >6fiaA (A:)
phmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslrs
rcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fiaB (B:)
gphmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslr
srcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

    Sequence, based on observed residues (ATOM records):
    >6fiaB (B:)
selrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslrsrcd
qleervsaaedeineikregkfrekrikrneqslqeiwdy

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6fiaC (C:)
gphmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslr
srcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

    Sequence, based on observed residues (ATOM records):
    >6fiaC (C:)
gkevenfeknleecitritntekclkelmelktkarelreecrslrsrcdqleervsaae
deineikregkfrekrikrneqslqeiwd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6fiaD (D:)
gphmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslr
srcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6fiaE (E:)
gphmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslr
srcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

    Sequence, based on observed residues (ATOM records):
    >6fiaE (E:)
evenfeknleecitritntekclkelmelktkarelreecrslrsrcdqleervsaaede
ineikregkfrekrikrneqslqeiwdy

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6fiaF (F:)
gphmselrediqtkgkevenfeknleecitritntekclkelmelktkarelreecrslr
srcdqleervsaaedeineikregkfrekrikrneqslqeiwdy

    Sequence, based on observed residues (ATOM records):
    >6fiaF (F:)
evenfeknleecitritntekclkelmelktkarelreecrslrsrcdqleervsaaede
ineikregkfrekrikrneqslqeiwdy