PDB entry 6fgo

View 6fgo on RCSB PDB site
Description: Fc in complex with engineered calcium binding domain Z
Class: immune system
Keywords: Antibody, Protein A, EF-hand, calcium-binding, IMMUNE SYSTEM
Deposited on 2018-01-11, released 2018-06-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Immunoglobulin gamma-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0DOX5 (0-End)
      • conflict (119)
      • conflict (121)
  • Chain 'B':
    Compound: Immunoglobulin gamma-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0DOX5 (0-End)
      • conflict (119)
      • conflict (121)
  • Chain 'C':
    Compound: Immunoglobulin gamma-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0DOX5 (0-End)
      • conflict (119)
      • conflict (121)
  • Chain 'D':
    Compound: Immunoglobulin gamma-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0DOX5 (0-End)
      • conflict (119)
      • conflict (121)
  • Chain 'E':
    Compound: Z-Ca
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FGO
    Domains in SCOPe 2.08: d6fgoe_
  • Chain 'F':
    Compound: Z-Ca
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FGO (0-End)
    Domains in SCOPe 2.08: d6fgof_
  • Chain 'G':
    Compound: Z-Ca
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FGO
    Domains in SCOPe 2.08: d6fgog_
  • Chain 'H':
    Compound: Z-Ca
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • PDB 6FGO
    Domains in SCOPe 2.08: d6fgoh_
  • Heterogens: PEG, GOL, CA, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6fgoE (E:)
vdnklnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeak
klndarapk

    Sequence, based on observed residues (ATOM records): (download) 
    >6fgoE (E:)
nklnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeakkl
ndar

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6fgoF (F:)
vdnklnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeak
klndarapk

    Sequence, based on observed residues (ATOM records): (download) 
    >6fgoF (F:)
vdnklnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeak
klndara

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6fgoG (G:)
vdnklnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeak
klndarapk

    Sequence, based on observed residues (ATOM records): (download) 
    >6fgoG (G:)
klnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeakkln
darap

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6fgoH (H:)
vdnklnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeak
klndarapk

    Sequence, based on observed residues (ATOM records): (download) 
    >6fgoH (H:)
lnkeqqnafyeilhlpnlneeqrkafiqslidgggdtngngyldaeesanllaeakklnd
arap