PDB entry 6fg9

View 6fg9 on RCSB PDB site
Description: mouse sorcs2 ectodomain (sortilin related vps10 domain containing receptor 2)
Deposited on 2018-01-10, released 2018-08-01
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 4.2 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: VPS10 domain-containing receptor SorCS2
    Species: Mus musculus [TaxId:10090]
    Gene: Sorcs2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9EPR5
      • conflict (137)
  • Chain 'B':
    Compound: VPS10 domain-containing receptor SorCS2
    Species: Mus musculus [TaxId:10090]
    Gene: Sorcs2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9EPR5
      • conflict (137)
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fg9A (A:)
garavpvagaasasraqvslistsfvlkgdathnqamvhwtgenssvililtkyyhadmg
kvlesslwrssdfgttytkltlqpgvttvidnfyicpankrkiilvssslgdreqslfls
tdegatfqkypvpflvetllfhpkeedkvlaytkdsklyvssdlgkkwtllqervtkdhv
fwavsgvdddpnlvhveaqdlsggyryytcliyncsaqphiapfsgpidrgsltvqdeyi
flkatstnrtkyyvsyrrsdfvlmklpkyalpkdlqiistdeqqvfvavqewnqvdtynl
yqsdlrgvryslvlenvrssrqaeenvvidilevrgvkgvflanqkvdgkvttvitynkg
rdwdylrppstdmngkptncqppdcylhlhlrwadnpyvsgtvhtkdtapglimgagnlg
sqlveykeemyitsdcghtwrqvfeeehhvlyldhggviaaikdtsiplkilkfsvdegh
twsthnftstsvfvdgllsepgdetlvmtvfghisfrsdwelvkvdfrpsfprqcgeddy
sswdltdlqgdhcimgqqrsyrkrkstswcvkgrsftsaltsrvckcrdsdflcdygfer
ssssestankcsanfwfnplsppedcvlgqtytsslgyrkvvsnvceggvdlqqspvqlq
cplqaprglqvsirgeavavrpredvlfvvrqeqgdvlttkyqvdlgdgfkamyvnltlt
gepirhhyespgiyrvsvraenmaghdeavlfvqvnsplqalylevvpvigvnqevnlta
vllplnpnltvfywwighslqpllsldnsvttkftdagdvrvtvqaacgnsvlqdsrlvr
vldqfqvvplrfsreldtfnpntpewredvglvvtrllsketsipeellvtvvkpglpti
adlyvllplprptrkrsltsdkrlaavqqalnshrisfilrgglrilvelrdtdtgpqrp
ggsaaahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6fg9A (A:)
qvslistsfvlkgdathnqamvhwtgenssvililtkyyhadmgkvlesslwrssdfgtt
ytkltlqpgvttvidnfyicpakiilvssslgdreqslflstdegatfqkypvpflvetl
lfhpkeedkvlaytkdsklyvssdlgkkwtllqervtkdhvfwavsgvdddpnlvhveaq
dlsggyryytcliyncsaqphiapfsgpidrgsltvqdeyiflkatstnrtkyyvsyrrs
dfvlmklpkyalpkdlqiistdeqqvfvavqewnqvdtynlyqsdlrgvryslvlenvrs
srqaeenvvidilevrgvkgvflanqkvdgkvttvitynkgrdwdylrppstdmngkptn
cqppdcylhlhlrwadnvhtkdtapglimgagnlgsqlveykeemyitsdcghtwrqvfe
eehhvlyldhggviaaikdtsiplkilkfsvdeghtwsthnftstsvfvdgllseptlvm
tvfghisfrsdwelvkvdfrpsfprqcgeddysswdltdlqgdhcimgqqrsyrkrksts
wcvkgrsftsaltsrvckcrdsdflcdygferssssestankcsanfwfnplsppedcvl
gqtytsslgyrkvvsnvceggvdlqqspvqlqcplqaprglqvsirgeavavrpredvlf
vvrqeqgdvlttkyqvdlgdgfkamyvnltltgepirhhyespgiyrvsvraenmaghde
avlfvqvnsplqalylevvpvigvnqevnltavllplnpnltvfywwighslqpllsldn
svttkftdagdvrvtvqaacgnsvlqdsrlvrvldqfqvvplrfsreldtfnpntpewre
dvglvvtrllsketsipeellvtvvkpglptiadlyvllpltsdkrlaavqqalnshris
filrgglrilvelrd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fg9B (B:)
garavpvagaasasraqvslistsfvlkgdathnqamvhwtgenssvililtkyyhadmg
kvlesslwrssdfgttytkltlqpgvttvidnfyicpankrkiilvssslgdreqslfls
tdegatfqkypvpflvetllfhpkeedkvlaytkdsklyvssdlgkkwtllqervtkdhv
fwavsgvdddpnlvhveaqdlsggyryytcliyncsaqphiapfsgpidrgsltvqdeyi
flkatstnrtkyyvsyrrsdfvlmklpkyalpkdlqiistdeqqvfvavqewnqvdtynl
yqsdlrgvryslvlenvrssrqaeenvvidilevrgvkgvflanqkvdgkvttvitynkg
rdwdylrppstdmngkptncqppdcylhlhlrwadnpyvsgtvhtkdtapglimgagnlg
sqlveykeemyitsdcghtwrqvfeeehhvlyldhggviaaikdtsiplkilkfsvdegh
twsthnftstsvfvdgllsepgdetlvmtvfghisfrsdwelvkvdfrpsfprqcgeddy
sswdltdlqgdhcimgqqrsyrkrkstswcvkgrsftsaltsrvckcrdsdflcdygfer
ssssestankcsanfwfnplsppedcvlgqtytsslgyrkvvsnvceggvdlqqspvqlq
cplqaprglqvsirgeavavrpredvlfvvrqeqgdvlttkyqvdlgdgfkamyvnltlt
gepirhhyespgiyrvsvraenmaghdeavlfvqvnsplqalylevvpvigvnqevnlta
vllplnpnltvfywwighslqpllsldnsvttkftdagdvrvtvqaacgnsvlqdsrlvr
vldqfqvvplrfsreldtfnpntpewredvglvvtrllsketsipeellvtvvkpglpti
adlyvllplprptrkrsltsdkrlaavqqalnshrisfilrgglrilvelrdtdtgpqrp
ggsaaahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6fg9B (B:)
qvslistsfvlkgdathnqamvhwtgenssvililtkyyhadmgkvlesslwrssdfgtt
ytkltlqpgvttvidnfyicpakiilvssslgdreqslflstdegatfqkypvpflvetl
lfhpkeedkvlaytkdsklyvssdlgkkwtllqervtkdhvfwavsgvdddpnlvhveaq
dlsggyryytcliyncsiapfsgpidrgsltvqdeyiflkatstnrtkyyvsyrrsdfvl
mklpkyalpkdlqiistdeqqvfvavqewnqvdtynlyqsdlrgvryslvlenvrssrqa
eenvvidilevrgvkgvflanqkvdgkvttvitynkgrdwdylrppstdmngkptncqpp
dcylhlhlrwadnpyvsgtvhtkdtapglimgagnlgsqlveykeemyitsdcghtwrqv
feeehhvlyldhggviaaikdtsiplkilkfsvdeghtwsthnftstsvfvdgllsepgd
etlvmtvfghisfrsdwelvkvdfrpsfprqcgeddysswdltdlqgdhcimgqqrsyrk
rkstswcvkgrsftsaltsrvckcrdsdflcdygferssssestkcsanfwfnplspped
cvlgqtytsslgyrkvvsnvceggvdlqqspvqlqcplqaprglqvsirgeavavrpred
vlfvvrqeqgdvlttkyqvdlgdgfkamyvnltltgepirhhyespgiyrvsvraenmag
hdeavlfvqvnsplqalylevvpvigvnqevnltavllplnpnltvfywwighslqplls
ldnsvttkftdagdvrvtvqaacgnsvlqdsrlvrvldqfqvvplrfsreldtfnpntpe
wredvglvvtrllsketsipeellvtvvkpglptiadlyvllpltsdkrlaavqqalnsh
risfilrgglrilvelrd