PDB entry 6fea

View 6fea on RCSB PDB site
Description: a. vinelandii vanadium nitrogenase, turnover state
Deposited on 2017-12-31, released 2018-03-28
The last revision was dated 2018-04-11, with a file datestamp of 2018-04-06.
Experiment type: XRAY
Resolution: 1.2 Å
R-factor: N/A
AEROSPACI score: 0.65 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nitrogenase protein alpha chain
    Species: Azotobacter vinelandii DJ [TaxId:322710]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Vanadium nitrogenase beta subunit, vnfK
    Species: Azotobacter vinelandii DJ [TaxId:322710]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Vanadium nitrogenase, delta subunit, VnfG
    Species: Azotobacter vinelandii DJ [TaxId:322710]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Nitrogenase protein alpha chain
    Species: Azotobacter vinelandii DJ [TaxId:322710]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Vanadium nitrogenase beta subunit, vnfK
    Species: Azotobacter vinelandii DJ [TaxId:322710]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Vanadium nitrogenase, delta subunit, VnfG
    Species: Azotobacter vinelandii DJ [TaxId:322710]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HCA, D6N, CO3, H2S, ZN, CLF, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6feaA (A:)
mpmvllecdkdiperqkhiylkapnedtreflpianaatipgtlsergcafcgaklvigg
vlkdtiqmihgplgcaydtwhtkryptdnghfnmkyvwstdmkeshvvfggekrleksmh
eafdempdikrmivyttcptaligddikavakkvmkdrpdvdvftvecpgfsgvsqskgh
hvlnigwinekvetmekeitseytmnfigdfniqgdtqllqtywdrlgiqvvahftgngt
yddlrcmhqaqlnvvncarssgyianelkkrygiprldidswgfnymaegirkicaffgi
eekgeeliaeeyakwkpkldwykerlqgkkmaiwtggprlwhwtksveddlgvqvvamss
kfgheedfekviargkegtyyiddgneleffeiidlvkpdviftgprvgelvkklhipyv
nghgyhngpymgfegfvnlardmynavhnplrhlaavdirdksqttpvivrgaa

    Sequence, based on observed residues (ATOM records):
    >6feaA (A:)
pmvllecdkdiperqkhiylkapnedtreflpianaatipgtlsergcafcgaklviggv
lkdtiqmihgplgcaydtwhtkryptdnghfnmkyvwstdmkeshvvfggekrleksmhe
afdempdikrmivyttcptaligddikavakkvmkdrpdvdvftvecpgfsgvsqskghh
vlnigwinekvetmekeitseytmnfigdfniqgdtqllqtywdrlgiqvvahftgngty
ddlrcmhqaqlnvvncarssgyianelkkrygiprldidswgfnymaegirkicaffgie
ekgeeliaeeyakwkpkldwykerlqgkkmaiwtggprlwhwtksveddlgvqvvamssk
fgheedfekviargkegtyyiddgneleffeiidlvkpdviftgprvgelvkklhipyvn
ghgyhngpymgfegfvnlardmynavhnplrhlaavdirdk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6feaB (B:)
msnceltvlkpaevklsprdregiinpmydcqpagaqyagigikdciplvhggqgctmfv
rllfaqhfkenfdvastslheesavfggakrveegvlvlarrypnlrvipiittcstevi
gddiegsirvcnraleaefpdrkiylapvhtpsfkgshvtgyaecvksvfktitdahgkg
qpsgklnvfpgwvnpgdvvllkryfkemdveaniymdtedfdspmlpnksiethgrttve
diadsanalatlslaryegnttgellqktfavpnalvntpygikntddmlrkiaevtgke
ipeslvrergialdaladlahmffankkvaifghpdlvlglaqfcmevelepvllligdd
qgnkykkdprieelkntahfdieivhnadlwelekrinaglqldlimghskgryvaiean
ipmvrvgfptfdraglyrkpsigyqgamelgemianamfahmeytrnkewilntw

    Sequence, based on observed residues (ATOM records):
    >6feaB (B:)
aevklsprdregiinpmydcqpagaqyagigikdciplvhggqgctmfvrllfaqhfken
fdvastslheesavfggakrveegvlvlarrypnlrvipiittcstevigddiegsirvc
nraleaefpdrkiylapvhtpsfkgshvtgyaecvksvfktitdahgkgqpsgklnvfpg
wvnpgdvvllkryfkemdveaniymdtedfdspmlpnksiethgrttvediadsanalat
lslaryegnttgellqktfavpnalvntpygikntddmlrkiaevtgkeipeslvrergi
aldaladlahmffankkvaifghpdlvlglaqfcmevelepvllligddqgnkykkdpri
eelkntahfdieivhnadlwelekrinaglqldlimghskgryvaieanipmvrvgfptf
draglyrkpsigyqgamelgemianamfahmeytrnkewilntw

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6feaC (C:)
msqshlddlfayveerclwqffsrtwdreeniegvlnqvgrlltgqeplrgtpqerlfya
dalamandvrerfpwasqvnkeeieflldglksrlvdvtitrstnrelnhhly

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6feaD (D:)
mpmvllecdkdiperqkhiylkapnedtreflpianaatipgtlsergcafcgaklvigg
vlkdtiqmihgplgcaydtwhtkryptdnghfnmkyvwstdmkeshvvfggekrleksmh
eafdempdikrmivyttcptaligddikavakkvmkdrpdvdvftvecpgfsgvsqskgh
hvlnigwinekvetmekeitseytmnfigdfniqgdtqllqtywdrlgiqvvahftgngt
yddlrcmhqaqlnvvncarssgyianelkkrygiprldidswgfnymaegirkicaffgi
eekgeeliaeeyakwkpkldwykerlqgkkmaiwtggprlwhwtksveddlgvqvvamss
kfgheedfekviargkegtyyiddgneleffeiidlvkpdviftgprvgelvkklhipyv
nghgyhngpymgfegfvnlardmynavhnplrhlaavdirdksqttpvivrgaa

    Sequence, based on observed residues (ATOM records):
    >6feaD (D:)
pmvllecdkdiperqkhiylkapnedtreflpianaatipgtlsergcafcgaklviggv
lkdtiqmihgplgcaydtwhtkryptdnghfnmkyvwstdmkeshvvfggekrleksmhe
afdempdikrmivyttcptaligddikavakkvmkdrpdvdvftvecpgfsgvsqskghh
vlnigwinekvetmekeitseytmnfigdfniqgdtqllqtywdrlgiqvvahftgngty
ddlrcmhqaqlnvvncarssgyianelkkrygiprldidswgfnymaegirkicaffgie
ekgeeliaeeyakwkpkldwykerlqgkkmaiwtggprlwhwtksveddlgvqvvamssk
fgheedfekviargkegtyyiddgneleffeiidlvkpdviftgprvgelvkklhipyvn
ghgyhngpymgfegfvnlardmynavhnplrhlaavdirdk

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6feaE (E:)
msnceltvlkpaevklsprdregiinpmydcqpagaqyagigikdciplvhggqgctmfv
rllfaqhfkenfdvastslheesavfggakrveegvlvlarrypnlrvipiittcstevi
gddiegsirvcnraleaefpdrkiylapvhtpsfkgshvtgyaecvksvfktitdahgkg
qpsgklnvfpgwvnpgdvvllkryfkemdveaniymdtedfdspmlpnksiethgrttve
diadsanalatlslaryegnttgellqktfavpnalvntpygikntddmlrkiaevtgke
ipeslvrergialdaladlahmffankkvaifghpdlvlglaqfcmevelepvllligdd
qgnkykkdprieelkntahfdieivhnadlwelekrinaglqldlimghskgryvaiean
ipmvrvgfptfdraglyrkpsigyqgamelgemianamfahmeytrnkewilntw

    Sequence, based on observed residues (ATOM records):
    >6feaE (E:)
aevklsprdregiinpmydcqpagaqyagigikdciplvhggqgctmfvrllfaqhfken
fdvastslheesavfggakrveegvlvlarrypnlrvipiittcstevigddiegsirvc
nraleaefpdrkiylapvhtpsfkgshvtgyaecvksvfktitdahgkgqpsgklnvfpg
wvnpgdvvllkryfkemdveaniymdtedfdspmlpnksiethgrttvediadsanalat
lslaryegnttgellqktfavpnalvntpygikntddmlrkiaevtgkeipeslvrergi
aldaladlahmffankkvaifghpdlvlglaqfcmevelepvllligddqgnkykkdpri
eelkntahfdieivhnadlwelekrinaglqldlimghskgryvaieanipmvrvgfptf
draglyrkpsigyqgamelgemianamfahmeytrnkewilntw

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6feaF (F:)
msqshlddlfayveerclwqffsrtwdreeniegvlnqvgrlltgqeplrgtpqerlfya
dalamandvrerfpwasqvnkeeieflldglksrlvdvtitrstnrelnhhly

    Sequence, based on observed residues (ATOM records):
    >6feaF (F:)
qshlddlfayveerclwqffsrtwdreeniegvlnqvgrlltgqeplrgtpqerlfyada
lamandvrerfpwasqvnkeeieflldglksrlvdvtitrstnrelnhhly