PDB entry 6fdl

View 6fdl on RCSB PDB site
Description: crystal structure of the nyn domain of human marf1
Deposited on 2017-12-26, released 2018-11-07
The last revision was dated 2018-12-26, with a file datestamp of 2018-12-21.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Meiosis regulator and mRNA stability factor 1
    Species: Homo sapiens [TaxId:9606]
    Gene: Marf1, Kiaa0430, Lkap
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y4F3 (5-153)
      • expression tag (2-4)
      • engineered mutation (44)
      • engineered mutation (110)
      • expression tag (154-155)
  • Chain 'B':
    Compound: Meiosis regulator and mRNA stability factor 1
    Species: Homo sapiens [TaxId:9606]
    Gene: Marf1, Kiaa0430, Lkap
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y4F3 (5-153)
      • expression tag (2-4)
      • engineered mutation (44)
      • engineered mutation (110)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fdlA (A:)
gplgspigvfwdiencsvpsgrsatavvqrirekffkghreaefmcvcdiskenkeviqe
lnncqvtvahinataknaaddklrqslrrfanthtapatvvlvstdvnfamelsdlrhrh
gfhiilvhknqaseallhhanelirfeefisdlphhhhhh

    Sequence, based on observed residues (ATOM records):
    >6fdlA (A:)
lgspigvfwdiencsvpsgrsatavvqrirekffkghreaefmcvcdiskenkeviqeln
ncqvtvahinataknaaddklrqslrrfanthtapatvvlvstdvnfamelsdlrhrhgf
hiilvhkneallhhanelirfeefisdlphh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fdlB (B:)
gplgspigvfwdiencsvpsgrsatavvqrirekffkghreaefmcvcdiskenkeviqe
lnncqvtvahinataknaaddklrqslrrfanthtapatvvlvstdvnfamelsdlrhrh
gfhiilvhknqaseallhhanelirfeefisdlphhhhhh

    Sequence, based on observed residues (ATOM records):
    >6fdlB (B:)
lgspigvfwdiencsvpsgrsatavvqrirekffkghreaefmcvcdiskenkeviqeln
ncqvtvahinatnaaddklrqslrrfanthtapatvvlvstdvnfamelsdlrhrhgfhi
ilvhknqaseallhhanelirfeefisdlp