PDB entry 6fbq

View 6fbq on RCSB PDB site
Description: crystal structure of the human retinoid x receptor dna-binding domain bound to the human mep dr1 response element, ph 7.0
Deposited on 2017-12-19, released 2018-12-05
The last revision was dated 2019-01-09, with a file datestamp of 2019-01-04.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Retinoic acid receptor RXR-alpha
    Species: Homo sapiens [TaxId:9606]
    Gene: RXRA, NR2B1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Retinoic acid receptor RXR-alpha
    Species: Homo sapiens [TaxId:9606]
    Gene: RXRA, NR2B1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA (5'-d(*cp*tp*gp*gp*gp*tp*cp*ap*ap*ap*gp*tp*tp*cp*ap*tp*c)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: DNA (5'-d(*gp*ap*tp*gp*ap*ap*cp*tp*tp*tp*gp*ap*cp*cp*cp*ap*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: ZN, MPO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fbqA (A:)
gshmftkhicaicgdrssgkhygvyscegckgffkrtvrkdltytcrdnkdclidkrqrn
rcqycryqkclamgmkreavqeerqrg

    Sequence, based on observed residues (ATOM records):
    >6fbqA (A:)
ftkhicaicgdrssgkhygvyscegckgffkrtvrkdltytcrdnkdclidkrqrnrcqy
cryqkclamgmkreavqeer

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6fbqB (B:)
gshmftkhicaicgdrssgkhygvyscegckgffkrtvrkdltytcrdnkdclidkrqrn
rcqycryqkclamgmkreavqeerqrg

    Sequence, based on observed residues (ATOM records):
    >6fbqB (B:)
tkhicaicgdrssgkhygvyscegckgffkrtvrkdltytcrdnkdclidkrqrnrcqyc
ryqkclamgmkreavqeerqr

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.