PDB entry 6fbc

View 6fbc on RCSB PDB site
Description: klentaq dna polymerase processing a modified primer - bearing the modification at the 3'-terminus of the primer.
Deposited on 2017-12-19, released 2018-09-26
The last revision was dated 2019-08-14, with a file datestamp of 2019-08-09.
Experiment type: XRAY
Resolution: 1.54 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase I, thermostable
    Species: Thermus aquaticus [TaxId:271]
    Gene: polA, pol1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'-d(*gp*ap*cp*cp*ap*cp*gp*gp*cp*cp*ap*(oh3))-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'C':
    Compound: DNA (5'-d(*ap*ap*ap*cp*gp*tp*gp*gp*cp*cp*gp*tp*gp*gp*tp*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: D4B, XG4, EDO, MN, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6fbcA (A:)
maleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargl
lakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalser
lfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarle
aevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivek
ilqyreltklkstyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplg
qrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpr
eavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektl
eegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfpr
leemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak
e

    Sequence, based on observed residues (ATOM records):
    >6fbcA (A:)
aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargll
akdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserl
fanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarlea
evfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpiveki
lqyreltklkstyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgq
rirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpre
avdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektle
egrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprl
eemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.