PDB entry 6f9n

View 6f9n on RCSB PDB site
Description: crystal structure of the human cpsf160-wdr33 complex
Deposited on 2017-12-14, released 2018-01-03
The last revision was dated 2018-01-03, with a file datestamp of 2017-12-29.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cleavage and polyadenylation specificity factor subunit 1
    Species: Homo sapiens [TaxId:9606]
    Gene: CPSF1, CPSF160
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: pre-mRNA 3' end processing protein WDR33
    Species: Homo sapiens [TaxId:9606]
    Gene: WDR33, WDC146
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f9nA (A:)
    myavykqahpptglefsmycnffnnsernlvvagtsqlyvyrlnrdaealtkndrstegk
    ahreklelaasfsffgnvmsmasvqlagakrdalllsfkdaklsvveydpgthdlktlsl
    hyfeepelrdgfvqnvhtprvrvdpdgrcaamlvygtrlvvlpfrreslaeeheglvgeg
    qrssflpsyiidvraldekllniidlqflhgyyeptllilfepnqtwpgrvavrqdtcsi
    vaislnitqkvhpviwsltslpfdctqalavpkpiggvvvfavnsllylnqsvppygval
    nslttgttafplrtqegvritldcaqatfisydkmvislkggeiyvltlitdgmrsvraf
    hfdkaaasvlttsmvtmepgylflgsrlgnslllkyteklqeppasavreaadkeeppsk
    kkrvdatagwsaagksvpqdevdeievygseaqsgtqlatysfevcdsilnigpcanaav
    gepaflseefqnspepdleivvcsghgkngalsvlqksirpqvvttfelpgcydmwtvia
    pvrkeeednpkgegteqepsttpeadddgrrhgflilsredstmilqtgqeimeldtsgf
    atqgptvfagnigdnryivqvsplgirllegvnqlhfipvdlgapivqcavadpyvvims
    aeghvtmfllksdsyggrhhrlalhkpplhhqskvitlclyrdlsgmfttesrlggarde
    lggrsgpeaeglgsetsptvddeeemlygdsgslfspskeearrssqppadrdpapfrae
    pthwcllvrengtmeiyqlpdwrlvflvknfpvgqrvlvdssfgqpttqgearreeatrq
    gelplvkevllvalgsrqsrpyllvhvdqelliyeafphdsqlgqgnlkvrfkkvphnin
    frekkpkpskkkaegggaeegagargrvarfryfediygysgvficgpsphwllvtgrga
    lrlhpmaidgpvdsfapfhnvncprgflyfnrqgelrisvlpaylsydapwpvrkiplrc
    tahyvayhveskvyavatstntpcariprmtgeekefetierderyihpqqeafsiqlis
    pvsweaipnarielqewehvtcmktvslrseetvsglkgyvaagtclmqgeevtcrgril
    imdvievvpepgqpltknkfkvlyekeqkgpvtalchcnghlvsaigqkiflwslrasel
    tgmafidtqlyihqmisvknfilaadvmksisllryqeesktlslvsrdakplevysvdf
    mvdnaqlgflvsdrdrnlmvymylpeakesfggmrllrradfhvgahvntfwrtpcrgat
    eglskksvvwenkhitwfatldggiglllpmqektyrrllmlqnalttmlphhaglnpra
    frmlhvdrrtlqnavrnvldgellnrylylstmerselakkigttpdiilddlletdrvt
    ahf
    

    Sequence, based on observed residues (ATOM records):
    >6f9nA (A:)
    myavykqahpptglefsmycnffnnsernlvvagtsqlyvyrlnreklelaasfsffgnv
    msmasvqlagakrdalllsfkdaklsvveydpgthdlktlslhyfeepelrdgfvqnvht
    prvrvdpdgrcaamlvygtrlvvlpfrrrssflpsyiidvraekllniidlqflhgyyep
    tllilfepnqtwpgrvavrqdtcsivaislnitqkvhpviwsltslpfdctqalavpkpi
    ggvvvfavnsllylnqsvppygvalnslttgttafplrtqegvritldcaqatfisydkm
    vislkggeiyvltlitdgmrsvrafhfdkaaasvlttsmvtmepgylflgsrlgnslllk
    yteklatysfevcdsilnigpcanaavgepaflseefqnspepdleivvcsghgkngals
    vlqksirpqvvttfelpgcydmwtviapgrrhgflilsredstmilqtgqeimeldtsgf
    atqgptvfagnigdnryivqvsplgirllegvnqlhfipvdlgapivqcavadpyvvims
    aeghvtmfllksdsyggrhhrlalhkpplhhqskvitlclyrdlsgmfttepthwcllvr
    engtmeiyqlpdwrlvflvknfpvgqrvlvdssplvkevllvalgsrqsrpyllvhvdqe
    lliyeafphdgnlkvrfkkvphninfrevarfryfediygysgvficgpsphwllvtgrg
    alrlhpmaidgpvdsfapfhnvncprgflyfnrqgelrisvlpaylsydapwpvrkiplr
    ctahyvayhveskvyavatstntpcariprmteekefetierderyihpqqeafsiqlis
    pvsweaipnarielqewehvtcmktvslrseetvsglkgyvaagtclmqgeevtcrgril
    imdvievvppltknkfkvlyekeqkgpvtalchcnghlvsaigqkiflwslraseltgma
    fidtqlyihqmisvknfilaadvmksisllryqeesktlslvsrdakplevysvdfmvdn
    aqlgflvsdrdrnlmvymylpeakesfggmrllrradfhvgahvntfwrtpcrenkhitw
    fatldggiglllpmqektyrrllmlqnalttmlphhaglnprafrmlhvnavrnvldgel
    lnrylylstmerselakkigttpdiilddlletdrvtahf
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f9nB (B:)
    snaqqamqqltfdgkrmrkavnrktidynpsvikylenriwqrdqrdmraiqpdagyynd
    lvppigmlnnpmnavttkfvrtstnkvkcpvfvvrwtpegrrlvtgassgeftlwngltf
    nfetilqahdspvramtwshndmwmltadhggyvkywqsnmnnvkmfqahkeaireasfs
    ptdnkfatcsddgtvriwdflrcheerilrghgadvkcvdwhptkglvvsgskdsqqpik
    fwdpktgqslatlhahkntvmevklnlngnwlltasrdhlcklfdirnlkeelqvfrghk
    keatavawhpvheglfasggsdgsllfwhvgvekevggmemahegmiwslawhplghilc
    sgsndhtskfwtrnrpgdk
    

    Sequence, based on observed residues (ATOM records):
    >6f9nB (B:)
    rktidynpsvikylenriwqrdqrdmraiqpdagyyndlvppigmlnnpmnavttkfvrt
    stnkvkcpvfvvrwtpegrrlvtgassgeftlwngltfnfetilqahdspvramtwshnd
    mwmltadhggyvkywqsnmnnvkmfqahkeaireasfsptdnkfatcsddgtvriwdflr
    cheerilrghgadvkcvdwhptkglvvsgskdsqqpikfwdpktgqslatlhahkntvme
    vklnlngnwlltasrdhlcklfdirnlkeelqvfrghkkeatavawhpvheglfasggsd
    gsllfwhvgvekevggmemahegmiwslawhplghilcsgsndhtskfwtrnrpgdk