PDB entry 6f97

View 6f97 on RCSB PDB site
Description: crystal structure of the v465t mutant of 5-(hydroxymethyl)furfural oxidase (hmfo)
Deposited on 2017-12-14, released 2018-02-14
The last revision was dated 2018-03-14, with a file datestamp of 2018-03-09.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5-(hydroxymethyl)furfural oxidase
    Species: Methylovorus sp. (strain MP688) [TaxId:887061]
    Gene: MPQ_0130
    Database cross-references and differences (RAF-indexed):
    • Uniprot E4QP00
      • engineered mutation (464)
  • Chain 'B':
    Compound: 5-(hydroxymethyl)furfural oxidase
    Species: Methylovorus sp. (strain MP688) [TaxId:887061]
    Gene: MPQ_0130
    Database cross-references and differences (RAF-indexed):
    • Uniprot E4QP00
      • engineered mutation (464)
  • Heterogens: FAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f97A (A:)
mtdtifdyvivgggtagsvlanrlsarpenrvllieagidtpennippeihdglrpwlpr
lsgdkffwpnltihraaehpgitrepqfyeqgrllgggssvnmvvsnrglprdydewqal
gadgwdwqgvlpyfikterdadygddplhgnagpipigrvdsrhwsdftvaatqaleaag
lpnihdqnarfddgyfppaftlkgeerfsaargyldasvrvrpnlslwtesrvlkllttg
naitgvsvlrgretlqvqareviltagalqspaillrtgigpaadlhalgipvladrpgv
grnlwehssigvvaplteqaradastgkagsrhqlgirassgvdpatpsdlflhigadpv
sglasavfwvnkpsstgwlklkdadpfsypdvdfnllsdprdlgrlkaglrlithyfaap
slakyglalalsrfaapqpggpllndllqdeaalerylrtnvggtwhasgtarigradds
qavvdkagrvygvtglrvadasimptvptantnlptlmlaekiadailtqa

    Sequence, based on observed residues (ATOM records):
    >6f97A (A:)
ifdyvivgggtagsvlanrlsarpenrvllieagidtpennippeihdglrpwlprlsgd
kffwpnltihraaehpgitrepqfyeqgrllgggssvnmvvsnrglprdydewqalgadg
wdwqgvlpyfikterdadygddplhgnagpipigrvdsrhwsdftvaatqaleaaglpni
hdqnarfddgyfppaftlkgeerfsaargyldasvrvrpnlslwtesrvlkllttgnait
gvsvlrgretlqvqareviltagalqspaillrtgigpaadlhalgipvladrpgvgrnl
wehssigvvaplteqaradastghqlgirassgvdpatpsdlflhigadpvsglasavfw
vnkpsstgwlklkdadpfsypdvdfnllsdprdlgrlkaglrlithyfaapslakyglal
alsrfaapqpggpllndllqdeaalerylrtnvggtwhasgtarigraddsqavvdkagr
vygvtglrvadasimptvptantnlptlmlaekiadailt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f97B (B:)
mtdtifdyvivgggtagsvlanrlsarpenrvllieagidtpennippeihdglrpwlpr
lsgdkffwpnltihraaehpgitrepqfyeqgrllgggssvnmvvsnrglprdydewqal
gadgwdwqgvlpyfikterdadygddplhgnagpipigrvdsrhwsdftvaatqaleaag
lpnihdqnarfddgyfppaftlkgeerfsaargyldasvrvrpnlslwtesrvlkllttg
naitgvsvlrgretlqvqareviltagalqspaillrtgigpaadlhalgipvladrpgv
grnlwehssigvvaplteqaradastgkagsrhqlgirassgvdpatpsdlflhigadpv
sglasavfwvnkpsstgwlklkdadpfsypdvdfnllsdprdlgrlkaglrlithyfaap
slakyglalalsrfaapqpggpllndllqdeaalerylrtnvggtwhasgtarigradds
qavvdkagrvygvtglrvadasimptvptantnlptlmlaekiadailtqa

    Sequence, based on observed residues (ATOM records):
    >6f97B (B:)
ifdyvivgggtagsvlanrlsarpenrvllieagidtkffwpnltihraaehpgitrepq
fyeqgrllgggsvvsnrglprdydewqalgadgwdwqgvlpyfikterdadygddplhgn
agpipigrvdsrhwsdftvaatqaleaaglpnihdqnarfddgyfppaftlksaargyld
asvrvrpnlslwtesrvlkllttgnaitgvsvlrgretlqvqareviltagalqspaill
rtgigpaadlhalgipvladrpgvgrnlwehssigvvaplteqaradasthqlgirassg
vdpatpsdlflhigadpvsglasavfwvnkpsstgwlklkdadpfsypdvdfnllsdprd
lgrlkaglrlithyfaapslakyglalalsrfaapqpggpllndllqdeaalerylrtnv
ggtwhasgtarigraddsqavvdkagrvygvtglrvadasimptvptantnlptlmlaek
iadailt