PDB entry 6f8z

View 6f8z on RCSB PDB site
Description: structure of the family gh92 alpha-mannosidase bt3130 from bacteroides thetaiotaomicron
Deposited on 2017-12-13, released 2018-05-02
The last revision was dated 2018-05-09, with a file datestamp of 2018-05-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alpha-1,2-mannosidase, putative
    Species: Bacteroides thetaiotaomicron [TaxId:818]
    Gene: ERS852430_04477, ERS852511_01397, SAMN02910322_03319
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Alpha-1,2-mannosidase, putative
    Species: Bacteroides thetaiotaomicron [TaxId:818]
    Gene: ERS852430_04477, ERS852511_01397, SAMN02910322_03319
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Alpha-1,2-mannosidase, putative
    Species: Bacteroides thetaiotaomicron [TaxId:818]
    Gene: ERS852430_04477, ERS852511_01397, SAMN02910322_03319
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f8zA (A:)
mgqageitkyvnpfigtgaidgglsgnnypgatspfgmiqlspdtseapnwgdasgydyn
rntifgfshtrlsgtgasdliditlmptssgrtssafthdeekarpgyyqvmlkdenina
eltttqrngihryqypagkdaeiildmdhsadkgswgrriinsqirilndhavegyriit
gwaklrkiyfymefsspiltstlrdggrvhentavingtnlhgcfrfgqlngkpltckva
lssvsmenarqnmeqeaphwdfdryvaaadadwekqlgkievkgtevqkeifytalyhtm
iqpntmsdvngeymaadyttrkvannethyttfslwdtfrashplytllepervtdfvks
mirqyeyygylpiwqlwgqdnycmignhsipvitdailkgipgidmekayeavynssvts
hpnspfevwekygfmpeniqtqsvsitleqafddwcvaqlaaklnkdadyqrfhkrseyy
rnlfhpktkffqskndkgewiepfdpyqyggngghpftegnawqyfwyvphniqalmelt
ggtkafeqkldtfftstykseqmnhnasgfvgqyahgnepshhvaylynfagqpwktqky
vshilntlynntssgyagnddcgqmsawyvfsamgfypvnpadgryiigsplldectlkl
agnkefrirtirkspediyiqsvtlngkkhkdffithqdimnggtmvfkmgkkpsgwgkl
ehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f8zA (A:)
qageitkyvnpfigtgaidgglsgnnypgatspfgmiqlspdtseapnwgdasgydynrn
tifgfshtrlsgtgasdliditlmptssgrtssafthdeekarpgyyqvmlkdeninael
tttqrngihryqypagkdaeiildmdhsadkgswgrriinsqirilndhavegyriitgw
aklrkiyfymefsspiltstlrdggrvhentavingtnlhgcfrfgqlngkpltckvals
svsmenarqnmeqeaphwdfdryvaaadadwekqlgkievkgtevqkeifytalyhtmiq
pntmsdvngeymaadyttrkvannethyttfslwdtfrashplytllepervtdfvksmi
rqyeyygylpiwqlwgqdnycmignhsipvitdailkgipgidmekayeavynssvtshp
nspfevwekygfmpeniqtqsvsitleqafddwcvaqlaaklnkdadyqrfhkrseyyrn
lfhpktkffqskndkgewiepfdpyqyggngghpftegnawqyfwyvphniqalmeltgg
tkafeqkldtfftstyksmnhnasgfvgqyahgnepshhvaylynfagqpwktqkyvshi
lntlynntssgyagnddcgqmsawyvfsamgfypvnpadgryiigsplldectlklagnk
efrirtirkspediyiqsvtlngkkhkdffithqdimnggtmvfkmgkkpsgwgk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f8zB (B:)
mgqageitkyvnpfigtgaidgglsgnnypgatspfgmiqlspdtseapnwgdasgydyn
rntifgfshtrlsgtgasdliditlmptssgrtssafthdeekarpgyyqvmlkdenina
eltttqrngihryqypagkdaeiildmdhsadkgswgrriinsqirilndhavegyriit
gwaklrkiyfymefsspiltstlrdggrvhentavingtnlhgcfrfgqlngkpltckva
lssvsmenarqnmeqeaphwdfdryvaaadadwekqlgkievkgtevqkeifytalyhtm
iqpntmsdvngeymaadyttrkvannethyttfslwdtfrashplytllepervtdfvks
mirqyeyygylpiwqlwgqdnycmignhsipvitdailkgipgidmekayeavynssvts
hpnspfevwekygfmpeniqtqsvsitleqafddwcvaqlaaklnkdadyqrfhkrseyy
rnlfhpktkffqskndkgewiepfdpyqyggngghpftegnawqyfwyvphniqalmelt
ggtkafeqkldtfftstykseqmnhnasgfvgqyahgnepshhvaylynfagqpwktqky
vshilntlynntssgyagnddcgqmsawyvfsamgfypvnpadgryiigsplldectlkl
agnkefrirtirkspediyiqsvtlngkkhkdffithqdimnggtmvfkmgkkpsgwgkl
ehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f8zB (B:)
qageitkyvnpfigtgaidgglsgnnypgatspfgmiqlspdtseapnwgdasgydynrn
tifgfshtrlsgtgasdliditlmptssgrtssafthdeekarpgyyqvmlkdeninael
tttqrngihryqypagkdaeiildmdhsadkgswgrriinsqirilndhavegyriitgw
aklrkiyfymefsspiltstlrdggrvhentavingtnlhgcfrfgqlngkpltckvals
svsmenarqnmeqeaphwdfdryvaaadadwekqlgkievkgtevqkeifytalyhtmiq
pntmsdvngeymaadyttrkvannethyttfslwdtfrashplytllepervtdfvksmi
rqyeyygylpiwqlwgqdnycmignhsipvitdailkgipgidmekayeavynssvtshp
nspfevwekygfmpeniqtqsvsitleqafddwcvaqlaaklnkdadyqrfhkrseyyrn
lfhpktkffqskndkgewiepfdpyqygghpftegnawqyfwyvphniqalmeltggtka
feqkldtfftstygfvgqyahgnepshhvaylynfagqpwktqkyvshilntlynntssg
yagnddcgqmsawyvfsamgfypvnpadgryiigsplldectlklagnkefrirtirksp
ediyiqsvtlngkkhkdffithqdimnggtmvfkmgkkpsgwg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f8zC (C:)
mgqageitkyvnpfigtgaidgglsgnnypgatspfgmiqlspdtseapnwgdasgydyn
rntifgfshtrlsgtgasdliditlmptssgrtssafthdeekarpgyyqvmlkdenina
eltttqrngihryqypagkdaeiildmdhsadkgswgrriinsqirilndhavegyriit
gwaklrkiyfymefsspiltstlrdggrvhentavingtnlhgcfrfgqlngkpltckva
lssvsmenarqnmeqeaphwdfdryvaaadadwekqlgkievkgtevqkeifytalyhtm
iqpntmsdvngeymaadyttrkvannethyttfslwdtfrashplytllepervtdfvks
mirqyeyygylpiwqlwgqdnycmignhsipvitdailkgipgidmekayeavynssvts
hpnspfevwekygfmpeniqtqsvsitleqafddwcvaqlaaklnkdadyqrfhkrseyy
rnlfhpktkffqskndkgewiepfdpyqyggngghpftegnawqyfwyvphniqalmelt
ggtkafeqkldtfftstykseqmnhnasgfvgqyahgnepshhvaylynfagqpwktqky
vshilntlynntssgyagnddcgqmsawyvfsamgfypvnpadgryiigsplldectlkl
agnkefrirtirkspediyiqsvtlngkkhkdffithqdimnggtmvfkmgkkpsgwgkl
ehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f8zC (C:)
eitkyvnpfigtgaidgglsgnnypgatspfgmiqlspdtseapnwgdasgydynrntif
gfshtrlsgtgasdliditlmptssgrtssafthdeekarpgyyqvmlkdeninaelttt
qrngihryqypagkdaeiildmdhsadkgswgrriinsqirilndhavegyriitgwakl
rkiyfymefsspiltstlrdggrvhentavingtnlhgcfrfgqlngkpltckvalssvs
menarqnmeqeaphwdfdryvaaadadwekqlgkievkgtevqkeifytalyhtmiqpnt
msdvngeymaadyttrkvannethyttfslwdtfrashplytllepervtdfvksmirqy
eyygylpiwqlwgqdnycmignhsipvitdailkgipgidmekayeavynssvtshpnsp
fevwekygfmpeniqtqsvsitleqafddwcvaqlaaklnkdadyqrfhkrseyyrnlfh
pktkffqskndkgewiepfdpyqyggngghpftegnawqyfwyvphniqalmeltggtka
feqkldtfftstgfvgqyahgnepshhvaylynfagqpwktqkyvshilntlynntssgy
agnddcgqmsawyvfsamgfypvnpadgryiigsplldectlklagnkefrirtirkspe
diyiqsvtlngkkhkdffithqdimnggtmvfkmgkkpsg