PDB entry 6f8f

View 6f8f on RCSB PDB site
Description: co-crystal structure of spop math domain and human pdx1 fragment
Deposited on 2017-12-13, released 2018-11-28
The last revision was dated 2019-02-13, with a file datestamp of 2019-02-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'D':
    Compound: Speckle-type POZ protein
    Species: Homo sapiens [TaxId:9606]
    Gene: SPOP
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Pancreas/duodenum homeobox protein 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6f8fD (D:)
gamasgkvvkfsymwtinnfsfcreemgeviksstfssgandklkwclrvnpkgldeesk
dylslylllvscpksevrakfkfsilnakgeetkamesqrayrfvqgkdwgfkkfirrdf
lldeangllpddkltlfcevsvvqd

    Sequence, based on observed residues (ATOM records):
    >6f8fD (D:)
kvvkfsymwtinnfsfcreemgeviksstfssgandklkwclrvnpkgldeeskdylsly
lllvscpksevrakfkfsilnakgeetkamesqrayrfvqgkdwgfkkfirrdflldean
gllpddkltlfcevsvv

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6f8fG (G:)
peqdcavtsge

    Sequence, based on observed residues (ATOM records):
    >6f8fG (G:)
peqdcavtsg