PDB entry 6f87

View 6f87 on RCSB PDB site
Description: crystal structure of p. abyssi sua5 complexed with l-threonine and ppi
Deposited on 2017-12-12, released 2018-04-25
The last revision was dated 2018-06-27, with a file datestamp of 2018-06-22.
Experiment type: XRAY
Resolution: 2.62 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Threonylcarbamoyl-AMP synthase
    Species: Pyrococcus abyssi (strain GE5 / Orsay) [TaxId:272844]
    Gene: sua5, PYRAB15960, PAB1302
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UYB2 (0-338)
      • expression tag (339)
  • Chain 'B':
    Compound: Threonylcarbamoyl-AMP synthase
    Species: Pyrococcus abyssi (strain GE5 / Orsay) [TaxId:272844]
    Gene: sua5, PYRAB15960, PAB1302
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UYB2 (0-338)
      • expression tag (339)
  • Chain 'C':
    Compound: Threonylcarbamoyl-AMP synthase
    Species: Pyrococcus abyssi (strain GE5 / Orsay) [TaxId:272844]
    Gene: sua5, PYRAB15960, PAB1302
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UYB2 (0-338)
      • expression tag (339)
  • Chain 'D':
    Compound: Threonylcarbamoyl-AMP synthase
    Species: Pyrococcus abyssi (strain GE5 / Orsay) [TaxId:272844]
    Gene: sua5, PYRAB15960, PAB1302
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UYB2 (0-338)
      • expression tag (339)
  • Heterogens: POP, THR, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f87A (A:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f87A (A:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f87B (B:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f87B (B:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f87C (C:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f87C (C:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6f87D (D:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f87D (D:)
tiiinvrerieewkiriaagfiregklvafptetvyglganaldenavkrifeakgrpad
npliihiasfeqlevlakeipeeaemlakrfwpgpltlvlpksevvprvitggldtvavr
mpaheialklielserpiaapsanisgkpsptsahhvaedfygkieciidggetrigves
tvidltewppvllrpgglpleeiekvigeirihpavygksvdtakapgmkyrhyapsaev
ivvegprdkvrrkieeliakfkeegkkvgvigsgsydadevfylgdtveeiarnlfkalr
hmdrtgvdvilaegveekglglavmnrlrkasgyriikvh