PDB entry 6f7t

View 6f7t on RCSB PDB site
Description: crystal structure of an fab fragment in complex with a peptide from bacillus subtilis rnase y
Deposited on 2017-12-11, released 2018-10-31
The last revision was dated 2018-12-19, with a file datestamp of 2018-12-14.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fab ry79-90, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6F7T (0-End)
  • Chain 'B':
    Compound: fab ry79-90, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6F7T (0-210)
  • Chain 'C':
    Compound: Ribonuclease Y
    Species: BACILLUS SUBTILIS, synthetic [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Ribonuclease Y
    Species: BACILLUS SUBTILIS, synthetic [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: fab ry79-90, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6F7T (0-210)
  • Chain 'L':
    Compound: fab ry79-90, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6F7T (0-217)
  • Heterogens: MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f7tA (A:)
qlvltqsssasfslgasakltctlsrqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqeedeaiyicgvgdtikeqfvyvfgggtkvtvlgqpks
tptltvfppsseelkenkatlvclisnfspsgvtvawkangtpitqgvdtsnptkegnkf
massflhltsdqwrshnsftcqvthegdtvekslspae

    Sequence, based on observed residues (ATOM records):
    >6f7tA (A:)
qlvltqsssasfslgasakltctlsrqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqeedeaiyicgvgdtikeqfvyvfgggtkvtvlgqpks
tptltvfppsseelkenkatlvclisnfspsgvtvawkangtpitqgvdtsnptkegnkf
massflhltsdqwrshnsftcqvthegdtvekslspa

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6f7tB (B:)
qvqlqesgpelkkpgetvkisckvsgypftnygmnwvkqaprkvlkwmgwidtytgdpty
addfkgrfafsldtsastaylqinnlknedtatyfcargtywgqgtlvtvsaakttapsv
yplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdlytlsssv
tvtsstwpsqsitcnvahpasstkvdkkiep

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6f7tC (C:)
errnelqkqenr

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6f7tD (D:)
errnelqkqenr

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6f7tH (H:)
qvqlqesgpelkkpgetvkisckvsgypftnygmnwvkqaprkvlkwmgwidtytgdpty
addfkgrfafsldtsastaylqinnlknedtatyfcargtywgqgtlvtvsaakttapsv
yplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdlytlsssv
tvtsstwpsqsitcnvahpasstkvdkkiep

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6f7tL (L:)
qlvltqsssasfslgasakltctlsrqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqeedeaiyicgvgdtikeqfvyvfgggtkvtvlgqpks
tptltvfppsseelkenkatlvclisnfspsgvtvawkangtpitqgvdtsnptkegnkf
massflhltsdqwrshnsftcqvthegdtvekslspae