PDB entry 6f5z

View 6f5z on RCSB PDB site
Description: complex between the haloferax volcanii trm112 methyltransferase activator and the hvo_0019 putative methyltransferase
Deposited on 2017-12-04, released 2018-07-11
The last revision was dated 2018-10-03, with a file datestamp of 2018-09-28.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 24-sterol C-methyltransferase
    Species: Haloferax volcanii [TaxId:309800]
    Gene: C498_18333
    Database cross-references and differences (RAF-indexed):
    • Uniprot L9UJ72 (Start-225)
      • expression tag (226)
  • Chain 'B':
    Compound: 24-sterol C-methyltransferase
    Species: Haloferax volcanii [TaxId:309800]
    Gene: C498_18333
    Database cross-references and differences (RAF-indexed):
    • Uniprot L9UJ72 (Start-225)
      • expression tag (226-230)
  • Chain 'C':
    Compound: UPF0434 family protein
    Species: Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) [TaxId:309800]
    Gene: HVO_1131
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: UPF0434 family protein
    Species: Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) [TaxId:309800]
    Gene: HVO_1131
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SAH, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f5zA (A:)
msvrdefdawaadgrdkgmedrhwhtakhalarmpveegdtvvdlgtgsgyalralrdtk
gigrgfgldgspemvqnaraytdtddlsflvgdfddlpfdddsvdhvwsmeafyyaadph
htleeiarilkpggtfycavnyyeenvhshewqehisidmtrwshaeyreafrdaglhva
eqdsiadldidipaatefptddwetreamveryrtfgtlltvgvaphhhhh

    Sequence, based on observed residues (ATOM records):
    >6f5zA (A:)
svrdefdawaadgrdkgmedrhwhtakhalarmpveegdtvvdlgtgsgyalralrdtkg
igrgfgldgspemvqnaraytdtddlsflvgdfddlpfdddsvdhvwsmeafyyaadphh
tleeiarilkpggtfycavnyyeenvhshewqehisidmtrwshaeyreafrdaglhvae
qdsiadldidipaatefptddwetreamveryrtfgtlltvgvaph

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f5zB (B:)
msvrdefdawaadgrdkgmedrhwhtakhalarmpveegdtvvdlgtgsgyalralrdtk
gigrgfgldgspemvqnaraytdtddlsflvgdfddlpfdddsvdhvwsmeafyyaadph
htleeiarilkpggtfycavnyyeenvhshewqehisidmtrwshaeyreafrdaglhva
eqdsiadldidipaatefptddwetreamveryrtfgtlltvgvaphhhhh

    Sequence, based on observed residues (ATOM records):
    >6f5zB (B:)
svrdefdawaardkgmedrhwhtakhalarmpveegdtvvdlgtgsgyalralrdtkgig
rgfgldgspemvqnaraytdtddlsflvgdfddlpfdddsvdhvwsmeafyyaadphhtl
eeiarilkpggtfycavnyyeenvhshewqehisidmtrwshaeyreafrdaglhvaeqd
siadldidipaatefptddwetreamveryrtfgtlltvgvaphhhhh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f5zC (C:)
mkeslmdilcdpldkselelevderdgdeiiegrligtvtgevypiedgipnllppdmrd
d

    Sequence, based on observed residues (ATOM records):
    >6f5zC (C:)
mkeslmdilcdpldkselelevderdgdeiiegrligtvtgevypiedgipnllppdmr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6f5zD (D:)
mkeslmdilcdpldkselelevderdgdeiiegrligtvtgevypiedgipnllppdmrd
d

    Sequence, based on observed residues (ATOM records):
    >6f5zD (D:)
mkeslmdilcdpldkselelevdereiiegrligtvtgevypiedgipnllppdm