PDB entry 6f5e

View 6f5e on RCSB PDB site
Description: crystal structure of darpin-darpin rigid fusion, variant dd_d12_10_47 in complex jnk1a1 and jip1 peptide
Deposited on 2017-12-01, released 2017-12-13
The last revision was dated 2017-12-13, with a file datestamp of 2017-12-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dd_d12_10_47
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6F5E (Start-324)
  • Chain 'B':
    Compound: Mitogen-activated protein kinase 8
    Species: Homo sapiens [TaxId:9606]
    Gene: MAPK8, JNK1, PRKM8, SAPK1, SAPK1C
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: C-Jun-amino-terminal kinase-interacting protein 1
    Species: MUS MUSCULUS, synthetic [TaxId:10090]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f5eA (A:)
mrgshhhhhhgsdlgkklleaaragqddevrillangadvntadetgftplhlaaweghl
givevllkngadvnanderghtplhlaaytghleivevllkngagvnatdvigtaplhla
amwghleivevllkngadvnaqdkfgktpydlatdngnqwiaellkraalrrklleaara
ghrdevedlikngadvnaidamgltplhlaamrghleivevllkygadvnaedyygttpl
rlaayighleivevllkygadvnaydisgttplhlaavlghleivevllkygadvnaqdk
fgktafdisidngnedlaeilqkln

    Sequence, based on observed residues (ATOM records):
    >6f5eA (A:)
gsdlgkklleaaragqddevrillangadvntadetgftplhlaaweghlgivevllkng
advnanderghtplhlaaytghleivevllkngagvnatdvigtaplhlaamwghleive
vllkngadvnaqdkfgktpydlatdngnqwiaellkraalrrklleaaraghrdevedli
kngadvnaidamgltplhlaamrghleivevllkygadvnaedyygttplrlaayighle
ivevllkygadvnaydisgttplhlaavlghleivevllkygadvnaqdkfgktafdisi
dngnedlaeilqkln

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f5eB (B:)
mrgshhhhhhgsrskrdnnfysveigdstftvlkryqnlkpigsgaqgivcaaydailer
nvaikklsrpfqnqthakrayrelvlmkcvnhkniigllnvftpqksleefqdvyivmel
mdanlcqviqmeldhermsyllyqmlcgikhlhsagiihrdlkpsnivvksdctlkildf
glartagtsfmmtpyvvtryyrapevilgmgykenvdlwsvgcimgemvchkilfpgrdy
idqwnkvieqlgtpcpefmkklqptvrtyvenrpkyagysfeklfpdvlfpadsehnklk
asqardllskmlvidaskrisvdealqhpyinvwydpseaeapppkipdkqlderehtie
ewkeliykevmdl

    Sequence, based on observed residues (ATOM records):
    >6f5eB (B:)
dnnfysveigdstftvlkryqnlkpiivcaaydailernvaikklsrpfqnqthakrayr
elvlmkcvnhkniigllnvftpqksleefqdvyivmelmdanlcqviqmeldhermsyll
yqmlcgikhlhsagiihrdlkpsnivvksdctlkildfglartagtsfmvvtryyrapev
ilgmgykenvdlwsvgcimgemvchkilfpgrdyidqwnkvieqlgtpcpefmkklqptv
rtyvenrpkyagysfeklfpdvlfpadsehnklkasqardllskmlvidaskrisvdeal
qhpyinvwydpseaeapppkipdkqlderehtieewkeliykevmd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f5eC (C:)
rpkrpttlnlf

    Sequence, based on observed residues (ATOM records):
    >6f5eC (C:)
pkrpttlnlf