PDB entry 6f58

View 6f58 on RCSB PDB site
Description: crystal structure of human brachyury (t) in complex with dna
Deposited on 2017-12-01, released 2017-12-13
The last revision was dated 2017-12-13, with a file datestamp of 2017-12-08.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Brachyury protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O15178 (Start-185)
      • conflict (1)
      • expression tag (186)
  • Chain 'B':
    Compound: Brachyury protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA (5'-d(*ap*ap*tp*tp*tp*cp*ap*cp*ap*cp*cp*tp*ap*gp*gp*tp*gp*tp*gp*ap*ap*ap*tp*t)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: DNA (5'-d(*ap*ap*tp*tp*tp*cp*ap*cp*ap*cp*cp*tp*ap*gp*gp*tp*gp*tp*gp*ap*ap*ap*tp*t)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f58A (A:)
mgelrvgleeselwlrfkeltnemivtkngrrmfpvlkvnvsgldpnamysflldfvaad
nhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkapvsfskvkltnklngggqi
mlnslhkyeprihivrvggpqrmitshcfpetqfiavtayqneeitalkikynpfakafl
dakershhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f58A (A:)
gelrvgleeselwlrfkeltnemivtkngrrmfpvlkvnvsgldpnamysflldfvaadn
hrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhk
yeprihivrvggpqrmitshcfpetqfiavtayqneeitalkikynpfakafldakersh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f58B (B:)
mgelrvgleeselwlrfkeltnemivtkngrrmfpvlkvnvsgldpnamysflldfvaad
nhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkapvsfskvkltnklngggqi
mlnslhkyeprihivrvggpqrmitshcfpetqfiavtayqneeitalkikynpfakafl
dakershhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f58B (B:)
gelrvgleeselwlrfkeltnemivtkngrrmfpvlkvnvsgldpnamysflldfvaadn
hrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhk
yeprihivrvggpqrmitshcfpetqfiavtayqneeitalkikynpfakaflda

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.