PDB entry 6f4n

View 6f4n on RCSB PDB site
Description: human jmjd5 in complex with mn and 2og.
Deposited on 2017-11-29, released 2018-04-04
The last revision was dated 2018-04-04, with a file datestamp of 2018-03-29.
Experiment type: XRAY
Resolution: 2.54 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: JmjC domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: KDM8, JMJD5
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: JmjC domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: KDM8, JMJD5
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MN, AKG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f4nA (A:)
enlyfqsrpargslpeqpctkkaradhglipdvklektvprlhrpslqhfreqflvpgrp
vilkgvadhwpcmqkwsleyiqeiagcrtvpvevgsrytdeewsqtlmtvnefiskyivn
eprdvgylaqhqlfdqipelkqdisipdycslgdgeeeeitinawfgpqgtisplhqdpq
qnflvqvmgrkyirlyspqesgalyphdthllhntsqvdvenpdlekfpkfakapflsci
lspgeilfipvkywhyvraldlsfsvsfwws

    Sequence, based on observed residues (ATOM records):
    >6f4nA (A:)
lipdvklektvprlhrpslqhfreqflvpgrpvilkgvadhwpcmqkwsleyiqeiagcr
tvpvevgsrytdeewsqtlmtvnefiskyivneprdvgylaqhqlfdqipelkqdisipd
ycslgdgeeeeitinawfgpqgtisplhqdpqqnflvqvmgrkyirlyspqesgalyphd
thhntsqvdvenpdlekfpkfakapflscilspgeilfipvkywhyvraldlsfsvsfww
s

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f4nB (B:)
enlyfqsrpargslpeqpctkkaradhglipdvklektvprlhrpslqhfreqflvpgrp
vilkgvadhwpcmqkwsleyiqeiagcrtvpvevgsrytdeewsqtlmtvnefiskyivn
eprdvgylaqhqlfdqipelkqdisipdycslgdgeeeeitinawfgpqgtisplhqdpq
qnflvqvmgrkyirlyspqesgalyphdthllhntsqvdvenpdlekfpkfakapflsci
lspgeilfipvkywhyvraldlsfsvsfwws

    Sequence, based on observed residues (ATOM records):
    >6f4nB (B:)
lipdvklektvprlhrpslqhfreqflvpgrpvilkgvadhwpcmqkwsleyiqeiagcr
tvpvevgsrytdeewsqtlmtvnefiskyivneprdvgylaqhqlfdqipelkqdisipd
ycslgdgeeeeitinawfgpqgtisplhqdpqqnflvqvmgrkyirlyspqesgalyphd
thllhntsqvdvenpdlekfpkfakapflscilspgeilfipvkywhyvraldlsfsvsf
wws