PDB entry 6f49

View 6f49 on RCSB PDB site
Description: periplasmic domain of lolc lacking the hook.
Deposited on 2017-11-29, released 2018-07-25
The last revision was dated 2018-08-08, with a file datestamp of 2018-08-03.
Experiment type: XRAY
Resolution: 2.02 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lipoprotein-releasing system transmembrane protein LolC,Lipoprotein-releasing system transmembrane protein LolC
    Species: Escherichia coli [TaxId:83333]
    Gene: lolC, ycfU, b1116, JW5161
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0ADC3 (0-120)
      • linker (119-120)
    • Uniprot P0ADC3 (121-207)
  • Chain 'B':
    Compound: Lipoprotein-releasing system transmembrane protein LolC,Lipoprotein-releasing system transmembrane protein LolC
    Species: Escherichia coli [TaxId:83333]
    Gene: lolC, ycfU, b1116, JW5161
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0ADC3 (0-120)
      • linker (119-120)
      • expression tag (208)
    • Uniprot P0ADC3 (121-207)
  • Chain 'C':
    Compound: Lipoprotein-releasing system transmembrane protein LolC,Lipoprotein-releasing system transmembrane protein LolC
    Species: Escherichia coli [TaxId:83333]
    Gene: lolC, ycfU, b1116, JW5161
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0ADC3 (0-120)
      • linker (119-120)
      • expression tag (208-211)
    • Uniprot P0ADC3 (121-207)
  • Chain 'D':
    Compound: Lipoprotein-releasing system transmembrane protein LolC,Lipoprotein-releasing system transmembrane protein LolC
    Species: Escherichia coli [TaxId:83333]
    Gene: lolC, ycfU, b1116, JW5161
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0ADC3 (0-120)
      • linker (119-120)
      • expression tag (208-211)
    • Uniprot P0ADC3 (121-207)
  • Heterogens: GOL, PG5, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f49A (A:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknmaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f49A (A:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f49B (B:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknmaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f49B (B:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknma

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f49C (C:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknmaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f49C (C:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknmaaal

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6f49D (D:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknmaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6f49D (D:)
mngferelqnnilglmpqailssehgslnpqqlpetavkldgvnrvapittgdvvlqsar
svavgvmlgidpaqkdpltpylvnvkqtdlepgkynvilgeqlasqlgvnrgdqirvmvg
asqrlfnvigtfaansevdgyemlvniedasrlmrypagnitgwrlwldeplkvdslsqq
klpegskwqdwrdrkgelfqavrmeknmaaal