PDB entry 6f3n

View 6f3n on RCSB PDB site
Description: crystal structure of s-adenosyl-l-homocysteine hydrolase from pseudomonas aeruginosa cocrystallized with sah in the presence of k+ and zn2+ cations
Deposited on 2017-11-28, released 2018-08-08
The last revision was dated 2018-08-08, with a file datestamp of 2018-08-03.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenosylhomocysteinase
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: ahcY, sahH, PA0432
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Adenosylhomocysteinase
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: ahcY, sahH, PA0432
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Adenosylhomocysteinase
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: ahcY, sahH, PA0432
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Adenosylhomocysteinase
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: ahcY, sahH, PA0432
    Database cross-references and differences (RAF-indexed):
  • Heterogens: K, ZN, PO4, NAD, ADN, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f3nA (A:)
snamsavmtpagftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakil
gcihmtiqtgvlietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeye
wcieqtilkdgqpwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlk
ngtlkvpainvndsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgss
qslrqegmivkvaevdpicamqacmdgfevvspykngindgteasidaallgkidlivtt
tgnvnvcdanmlkalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgf
dahnddylillaegrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakr
lsvevlpkkldeevalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

    Sequence, based on observed residues (ATOM records):
    >6f3nA (A:)
ftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakilgcihmtiqtgvl
ietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeyewcieqtilkdgq
pwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlkngtlkvpainvn
dsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgssqslrqegmivkv
aevdpicamqacmdgfevvspykngindgteasidaallgkidlivtttgnvnvcdanml
kalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgfdahnddylilla
egrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakrlsvevlpkklde
evalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f3nB (B:)
snamsavmtpagftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakil
gcihmtiqtgvlietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeye
wcieqtilkdgqpwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlk
ngtlkvpainvndsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgss
qslrqegmivkvaevdpicamqacmdgfevvspykngindgteasidaallgkidlivtt
tgnvnvcdanmlkalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgf
dahnddylillaegrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakr
lsvevlpkkldeevalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

    Sequence, based on observed residues (ATOM records):
    >6f3nB (B:)
ftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakilgcihmtiqtgvl
ietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeyewcieqtilkdgq
pwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlkngtlkvpainvn
dsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgssqslrqegmivkv
aevdpicamqacmdgfevvspykngindgteasidaallgkidlivtttgnvnvcdanml
kalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgfdahnddylilla
egrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakrlsvevlpkklde
evalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f3nC (C:)
snamsavmtpagftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakil
gcihmtiqtgvlietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeye
wcieqtilkdgqpwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlk
ngtlkvpainvndsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgss
qslrqegmivkvaevdpicamqacmdgfevvspykngindgteasidaallgkidlivtt
tgnvnvcdanmlkalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgf
dahnddylillaegrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakr
lsvevlpkkldeevalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

    Sequence, based on observed residues (ATOM records):
    >6f3nC (C:)
ftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakilgcihmtiqtgvl
ietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeyewcieqtilkdgq
pwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlkngtlkvpainvn
dsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgssqslrqegmivkv
aevdpicamqacmdgfevvspykngindgteasidaallgkidlivtttgnvnvcdanml
kalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgfdahnddylilla
egrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakrlsvevlpkklde
evalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6f3nD (D:)
snamsavmtpagftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakil
gcihmtiqtgvlietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeye
wcieqtilkdgqpwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlk
ngtlkvpainvndsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgss
qslrqegmivkvaevdpicamqacmdgfevvspykngindgteasidaallgkidlivtt
tgnvnvcdanmlkalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgf
dahnddylillaegrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakr
lsvevlpkkldeevalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry

    Sequence, based on observed residues (ATOM records):
    >6f3nD (D:)
gftdykvaditlaawgrreliiaesempalmglrrkyagqqplkgakilgcihmtiqtgv
lietlvalgaevrwsscnifstqdqaaaaiaaagipvfawkgeteeeyewcieqtilkdg
qpwdanmvlddggdlteilhkkypqmlerihgiteetttgvhrlldmlkngtlkvpainv
ndsvtkskndnkygcrhslndaikrgtdhllsgkqalvigygdvgkgssqslrqegmivk
vaevdpicamqacmdgfevvspykngindgteasidaallgkidlivtttgnvnvcdanm
lkalkkravvcnighfdneidtafmrknwaweevkpqvhkihrtgkdgfdahnddylill
aegrlvnlgnatghpsrimdgsfanqvlaqihlfeqkyadlpaaekakrlsvevlpkkld
eevalemvkgfggvvtqltpkqaeyigvsvegpfkpdtyry