PDB entry 6f2t

View 6f2t on RCSB PDB site
Description: crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase- 3 (npp3)
Deposited on 2017-11-27, released 2018-08-01
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: ENPP3, PDNP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P97675 (4-End)
      • variant (65)
      • variant (460-461)
  • Chain 'B':
    Compound: Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: ENPP3, PDNP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P97675 (4-End)
      • variant (65)
      • variant (460-461)
  • Heterogens: PO4, ZN, CA, NAG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f2tA (A:)
    aetgwvteacassqepqcpegfdqppvilfsmdgfraeylqtwstllpninklktcglhs
    kymravyptktfpnhytivtglypeshgiidnnmydvylnknfslssveksnpawwsgqp
    iwltamyqglkaasyywpgsdvavngsfpniyrnysnsvpyesriatllqwldlpkaerp
    sfytiyveepdsaghksgpvsagvikalqlvddafgmlmeglkqrnlhncvniivladhg
    mdqtscdrveymtdyfpeinfymyqgpaprirtrnipqdfftfnseeivrdlscrksdqh
    fkpyltpdlpkrlhyaknvridkvhlmvdrqwlayrnkgssnceggthgynnefksmeai
    flahgpsfkektviepfenievynllcdllhiqpapnngshgslnhllkapfyqpshaee
    lsksagcgfttplpkdslncsclalqtsgqeeqvnqrlnlnrgevsatektnlpfgrprv
    iqknkdhcllyhreyvsgfgkamkmpmwssytvpkpgdtsslpptvpdclradvrvdpse
    sqkcsfyladqnidhgflyppaikgnnesqydalitsnlvpmykefkkmwdyfhkvllik
    yaierngvnvvsgpifdynydghfdapdeitnyvagtdvpvpthyfvvltscknkthtpd
    scpgwldvlpfvvphrptnvescpenkaedlwveerfkahiarvrdvelltgldfyqekt
    qpvseilqlktylptfetiigtkhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6f2tA (A:)
    wvteacapqcpegfdqppvilfsmdgfraeylqtwstllpninklktcglhskymravyp
    tktfpnhytivtglypeshgiidnnmydvylnknfslssveksnpawwsgqpiwltamyq
    glkaasyywpgsdvavngsfpniyrnysnsvpyesriatllqwldlpkaerpsfytiyve
    epdsaghksgpvsagvikalqlvddafgmlmeglkqrnlhncvniivladhgmdqtscdr
    veymtdyfpeinfymyqgpaprirtrnipqdfftfnseeivrdlscrksdqhfkpyltpd
    lpkrlhyaknvridkvhlmvdrqwlayrnkgnceggthgynnefksmeaiflahgpsfke
    ktviepfenievynllcdllhiqpapnngshgslnhllkapfyqpshaeelsksagcgft
    tplpkdslncsclaqvnqrlnlnrgevsatektnlpfgrprviqknkdhcllyhreyvsg
    fgkamkmpmwssytvpkpgpptvpdclradvrvdpsesqkcsfylaidhgflyppaikgn
    nesqydalitsnlvpmykefkkmwdyfhkvllikyaierngvnvvsgpifdynydghfda
    pdeitnyvagtdvpvpthyfvvltscknkthtpdscpgwldvlpfvvphrptnvescpen
    kaedlwveerfkahiarvrdvelltgldfyqektqpvseilqlktylptf
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f2tB (B:)
    aetgwvteacassqepqcpegfdqppvilfsmdgfraeylqtwstllpninklktcglhs
    kymravyptktfpnhytivtglypeshgiidnnmydvylnknfslssveksnpawwsgqp
    iwltamyqglkaasyywpgsdvavngsfpniyrnysnsvpyesriatllqwldlpkaerp
    sfytiyveepdsaghksgpvsagvikalqlvddafgmlmeglkqrnlhncvniivladhg
    mdqtscdrveymtdyfpeinfymyqgpaprirtrnipqdfftfnseeivrdlscrksdqh
    fkpyltpdlpkrlhyaknvridkvhlmvdrqwlayrnkgssnceggthgynnefksmeai
    flahgpsfkektviepfenievynllcdllhiqpapnngshgslnhllkapfyqpshaee
    lsksagcgfttplpkdslncsclalqtsgqeeqvnqrlnlnrgevsatektnlpfgrprv
    iqknkdhcllyhreyvsgfgkamkmpmwssytvpkpgdtsslpptvpdclradvrvdpse
    sqkcsfyladqnidhgflyppaikgnnesqydalitsnlvpmykefkkmwdyfhkvllik
    yaierngvnvvsgpifdynydghfdapdeitnyvagtdvpvpthyfvvltscknkthtpd
    scpgwldvlpfvvphrptnvescpenkaedlwveerfkahiarvrdvelltgldfyqekt
    qpvseilqlktylptfetiigtkhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6f2tB (B:)
    wvteacaqcpegfdqppvilfsmdgfraeylqtwstllpninklktcglhskymravypt
    ktfpnhytivtglypeshgiidnnmydvylnknfslssveksnpawwsgqpiwltamyqg
    lkaasyywpgsdvavngsfpniyrnysnsvpyesriatllqwldlpkaerpsfytiyvee
    pdsaghksgpvsagvikalqlvddafgmlmeglkqrnlhncvniivladhgmdqtscdrv
    eymtdyfpeinfymyqgpaprirtrnipqdfftfnseeivrdlscrksdqhfkpyltpdl
    pkrlhyaknvridkvhlmvdrqwlayrnkgssnceggthgynnefksmeaiflahgpsfk
    ektviepfenievynllcdllhiqpapnngshgslnhllkapfyqpshaeelsksagcgf
    ttplpkdslncsclalqgqeeqvnqrlnlnrgevsatektnlpfgrprviqknkdhclly
    hreyvsgfgkamkmpmwssytvpkpgdlpptvpdclradvrvdpsesqkcsfyladqnid
    hgflyppaikgnnesqydalitsnlvpmykefkkmwdyfhkvllikyaierngvnvvsgp
    ifdynydghfdapdeitnyvagtdvpvpthyfvvltscknkthtpdscpgwldvlpfvvp
    hrptnvescpenkaedlwveerfkahiarvrdvelltgldfyqektqpvseilqlktylp
    tf