PDB entry 6f2d

View 6f2d on RCSB PDB site
Description: a flipqr complex forms the core of the salmonella type iii secretion system export apparatus.
Deposited on 2017-11-24, released 2018-07-04
The last revision was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: EM
Resolution: 4.2 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Flagellar biosynthetic protein FliP
    Species: Salmonella enterica subsp. enterica [TaxId:28901]
    Gene: fliP, LTSERUB_0568
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Flagellar biosynthetic protein FliP
    Species: Salmonella enterica subsp. enterica [TaxId:28901]
    Gene: fliP, LTSERUB_0568
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Flagellar biosynthetic protein FliP
    Species: Salmonella enterica subsp. enterica [TaxId:28901]
    Gene: fliP, LTSERUB_0568
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Flagellar biosynthetic protein FliP
    Species: Salmonella enterica subsp. enterica [TaxId:28901]
    Gene: fliP, LTSERUB_0568
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Flagellar biosynthetic protein FliP
    Species: Salmonella enterica subsp. enterica [TaxId:28901]
    Gene: fliP, LTSERUB_0568
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Flagellar biosynthetic protein FliR
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:28901]
    Gene: fliR, flaP, STM1981
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Flagellar biosynthetic protein FliQ
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:28901]
    Gene: fliQ, flaQ, STY2188, t0897
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Flagellar biosynthetic protein FliQ
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:28901]
    Gene: fliQ, flaQ, STY2188, t0897
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Flagellar biosynthetic protein FliQ
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:28901]
    Gene: fliQ, flaQ, STY2188, t0897
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Flagellar biosynthetic protein FliQ
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:28901]
    Gene: fliQ, flaQ, STY2188, t0897
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6f2dA (A:)
mrrllflslaglwlfspaaaaqlpglisqplagggqswslsvqtlvfitsltflpaillm
mtsftriiivfgllrnalgtpsappnqvllglalfltffimspvidkiyvdayqpfseqk
ismqealdkgaqplrafmlrqtreadlalfarlansgplqgpeavpmrillpayvtselk
tafqigftifipfliidlviasvlmalgmmmvppatialpfklmlfvlvdgwqllvgsla
qsfys

    Sequence, based on observed residues (ATOM records):
    >6f2dA (A:)
qtlvfitsltflpaillmmtsftriiivfgllrnalgtpsappnqvllglalfltffims
pvidkiyvdayqpfseqkismqealdkgaqplrafmlrqtreadlalfarlansgplqgp
eavpmrillpayvtselktafqigftifipfliidlviasvlmalgmmmvppatialpfk
lmlfvlvdgwqllvgslaqsfys

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6f2dB (B:)
mrrllflslaglwlfspaaaaqlpglisqplagggqswslsvqtlvfitsltflpaillm
mtsftriiivfgllrnalgtpsappnqvllglalfltffimspvidkiyvdayqpfseqk
ismqealdkgaqplrafmlrqtreadlalfarlansgplqgpeavpmrillpayvtselk
tafqigftifipfliidlviasvlmalgmmmvppatialpfklmlfvlvdgwqllvgsla
qsfys

    Sequence, based on observed residues (ATOM records):
    >6f2dB (B:)
qtlvfitsltflpaillmmtsftriiivfgllrnalgtpsappnqvllglalfltffims
pvidkiyvdayqpfseqkismqealdkgaqplrafmlrqtreadlalfarlansgplqgp
eavpmrillpayvtselktafqigftifipfliidlviasvlmalgmmmvppatialpfk
lmlfvlvdgwqllvgslaqsfys

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6f2dC (C:)
mrrllflslaglwlfspaaaaqlpglisqplagggqswslsvqtlvfitsltflpaillm
mtsftriiivfgllrnalgtpsappnqvllglalfltffimspvidkiyvdayqpfseqk
ismqealdkgaqplrafmlrqtreadlalfarlansgplqgpeavpmrillpayvtselk
tafqigftifipfliidlviasvlmalgmmmvppatialpfklmlfvlvdgwqllvgsla
qsfys

    Sequence, based on observed residues (ATOM records):
    >6f2dC (C:)
qtlvfitsltflpaillmmtsftriiivfgllrnalgtpsappnqvllglalfltffims
pvidkiyvdayqpfseqkismqealdkgaqplrafmlrqtreadlalfarlansgplqgp
eavpmrillpayvtselktafqigftifipfliidlviasvlmalgmmmvppatialpfk
lmlfvlvdgwqllvgslaqsfys

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6f2dD (D:)
mrrllflslaglwlfspaaaaqlpglisqplagggqswslsvqtlvfitsltflpaillm
mtsftriiivfgllrnalgtpsappnqvllglalfltffimspvidkiyvdayqpfseqk
ismqealdkgaqplrafmlrqtreadlalfarlansgplqgpeavpmrillpayvtselk
tafqigftifipfliidlviasvlmalgmmmvppatialpfklmlfvlvdgwqllvgsla
qsfys

    Sequence, based on observed residues (ATOM records):
    >6f2dD (D:)
qtlvfitsltflpaillmmtsftriiivfgllrnalgtpsappnqvllglalfltffims
pvidkiyvdayqpfseqkismqealdkgaqplrafmlrqtreadlalfarlansgplqgp
eavpmrillpayvtselktafqigftifipfliidlviasvlmalgmmmvppatialpfk
lmlfvlvdgwqllvgslaqsfys

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6f2dE (E:)
mrrllflslaglwlfspaaaaqlpglisqplagggqswslsvqtlvfitsltflpaillm
mtsftriiivfgllrnalgtpsappnqvllglalfltffimspvidkiyvdayqpfseqk
ismqealdkgaqplrafmlrqtreadlalfarlansgplqgpeavpmrillpayvtselk
tafqigftifipfliidlviasvlmalgmmmvppatialpfklmlfvlvdgwqllvgsla
qsfys

    Sequence, based on observed residues (ATOM records):
    >6f2dE (E:)
qtlvfitsltflpaillmmtsftriiivfgllrnalgtpsappnqvllglalfltffims
pvidkiyvdayqpfseqkismqealdkgaqplrafmlrqtreadlalfarlansgplqgp
eavpmrillpayvtselktafqigftifipfliidlviasvlmalgmmmvppatialpfk
lmlfvlvdgwqllvgslaqsfys

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6f2dF (F:)
miqvtseqwlywlhlyfwpllrvlalistapilseraipkrvklglgimitlviapslpa
ndtplfsiaalwlamqqiligialgftmqfafaavrtagefiglqmglsfatfvdpgshl
nmpvlarimdmlamllfltfnghlwlisllvdtfhtlpigsnpvnsnafmalaragglif
lnglmlalpvitllltlnlalgllnrmapqlsifvigfpltltvgimlmaalmpliapfc
ehlfseifnlladivsempinnnpenlyfqgqfgswshpqfekgggsgggsgggswshpq
fek

    Sequence, based on observed residues (ATOM records):
    >6f2dF (F:)
tseqwlywlhlyfwpllrvlalistapilseraipkrvklglgimitlviapslpandtp
lfsiaalwlamqqiligialgftmqfafaavrtagefiglqmglsfatfvdpgshlnmpv
larimdmlamllfltfnghlwlisllvdtfhtlpigsnpvnsnafmalaraggliflngl
mlalpvitllltlnlalgllnrmapqlsifvigfpltltvgimlmaalmpliapfcehlf
seifnlladivsempinn

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6f2dG (G:)
mtpesvmmmgteamkvalalaaplllvalitgliisilqaatqinemtlsfipkivavfi
aiivagpwmlnllldyvrtlfsnlpyiig

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6f2dH (H:)
mtpesvmmmgteamkvalalaaplllvalitgliisilqaatqinemtlsfipkivavfi
aiivagpwmlnllldyvrtlfsnlpyiig

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >6f2dI (I:)
mtpesvmmmgteamkvalalaaplllvalitgliisilqaatqinemtlsfipkivavfi
aiivagpwmlnllldyvrtlfsnlpyiig

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >6f2dJ (J:)
mtpesvmmmgteamkvalalaaplllvalitgliisilqaatqinemtlsfipkivavfi
aiivagpwmlnllldyvrtlfsnlpyiig