PDB entry 6f1z

View 6f1z on RCSB PDB site
Description: roadblock-1 region of the dynein tail/dynactin/bicdr1 complex
Deposited on 2017-11-23, released 2018-01-17
The last revision was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: EM
Resolution: 3.4 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'o':
    Compound: Cytoplasmic dynein 1 intermediate chain 2
    Species: Homo sapiens [TaxId:9606]
    Gene: Dync1i2, Dnci2, Dncic2
    Database cross-references and differences (RAF-indexed):
  • Chain 'p':
    Compound: Cytoplasmic dynein 1 intermediate chain 2
    Species: Homo sapiens [TaxId:9606]
    Gene: Dync1i2, Dnci2, Dncic2
    Database cross-references and differences (RAF-indexed):
  • Chain 's':
    Compound: Dynein light chain roadblock-type 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DYNLRB1, BITH, DNCL2A, DNLC2A, ROBLD1, HSPC162
    Database cross-references and differences (RAF-indexed):
  • Chain 't':
    Compound: Dynein light chain roadblock-type 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DYNLRB1, BITH, DNCL2A, DNLC2A, ROBLD1, HSPC162
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'o':
    Sequence, based on SEQRES records:
    >6f1zo (o:)
msdkselkaelerkkqrlaqireekkrkeeerkkketdqkkeavapvqeesdlekkrrea
eallqsmgltpespivpppmspssksvstpseagsqdsgdgavgsrrgpiklgmakitqv
dfppreivtytketqtpvmaqpkedeeedddvvapkppiepeeektlkkdeendskapph
elteeekqqilhseeflsffdhstriveralseqiniffdysgrdledkegeiqagakls
lnrqffderwskhrvvscldwssqypellvasynnnedaphepdgvalvwnmkykkttpe
yvfhcqsavmsatfakfhpnlvvggtysgqivlwdnrsnkrtpvqrtplsaaahthpvyc
vnvvgtqnahnlisistdgkicswsldmlshpqdsmelvhkqskavavtsmsfpvgdvnn
fvvgseegsvytacrhgskagisemfeghqgpitgihchaavgavdfshlfvtssfdwtv
klwstknnkplysfednagyvydvmwspthpalfacvdgmgrldlwnlnndtevptasis
vegnpalnrvrwthsgreiavgdsegqiviydvgeqiavprndewarfgrtlaeinanra
daeeeaatripa

    Sequence, based on observed residues (ATOM records):
    >6f1zo (o:)
lteeekqqilhseeflsffdhstriveralseqini

  • Chain 'p':
    Sequence, based on SEQRES records:
    >6f1zp (p:)
msdkselkaelerkkqrlaqireekkrkeeerkkketdqkkeavapvqeesdlekkrrea
eallqsmgltpespivpppmspssksvstpseagsqdsgdgavgsrrgpiklgmakitqv
dfppreivtytketqtpvmaqpkedeeedddvvapkppiepeeektlkkdeendskapph
elteeekqqilhseeflsffdhstriveralseqiniffdysgrdledkegeiqagakls
lnrqffderwskhrvvscldwssqypellvasynnnedaphepdgvalvwnmkykkttpe
yvfhcqsavmsatfakfhpnlvvggtysgqivlwdnrsnkrtpvqrtplsaaahthpvyc
vnvvgtqnahnlisistdgkicswsldmlshpqdsmelvhkqskavavtsmsfpvgdvnn
fvvgseegsvytacrhgskagisemfeghqgpitgihchaavgavdfshlfvtssfdwtv
klwstknnkplysfednagyvydvmwspthpalfacvdgmgrldlwnlnndtevptasis
vegnpalnrvrwthsgreiavgdsegqiviydvgeqiavprndewarfgrtlaeinanra
daeeeaatripa

    Sequence, based on observed residues (ATOM records):
    >6f1zp (p:)
lteeekqqilhseeflsffdhstriveralseqiniffdysgr

  • Chain 's':
    Sequence, based on SEQRES records:
    >6f1zs (s:)
maeveetlkrlqsqkgvqgiivvntegipikstmdnptttqyaslmhsfilkarstvrdi
dpqndltflrirskkneimvapdkdyfliviqnpte

    Sequence, based on observed residues (ATOM records):
    >6f1zs (s:)
eveetlkrlqsqkgvqgiivvntegipikstmdnptttqyaslmhsfilkarstvrdidp
qndltflrirskkneimvapdkdyfliviqnpt

  • Chain 't':
    Sequence, based on SEQRES records:
    >6f1zt (t:)
maeveetlkrlqsqkgvqgiivvntegipikstmdnptttqyaslmhsfilkarstvrdi
dpqndltflrirskkneimvapdkdyfliviqnpte

    Sequence, based on observed residues (ATOM records):
    >6f1zt (t:)
eveetlkrlqsqkgvqgiivvntegipikstmdnptttqyaslmhsfilkarstvrdidp
qndltflrirskkneimvapdkdyfliviqnpt