PDB entry 6ezd

View 6ezd on RCSB PDB site
Description: pyrrolysyl-trna synthetase from canditatus methanomethylophilus alvus (mmapylrs)
Deposited on 2017-11-15, released 2018-12-12
The last revision was dated 2018-12-12, with a file datestamp of 2018-12-07.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus Mx1201 1) [TaxId:1236689]
    Gene: MMALV_11280
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus Mx1201 1) [TaxId:1236689]
    Gene: MMALV_11280
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus Mx1201 1) [TaxId:1236689]
    Gene: MMALV_11280
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus Mx1201 1) [TaxId:1236689]
    Gene: MMALV_11280
    Database cross-references and differences (RAF-indexed):
    • Uniprot M9SC49 (Start-274)
      • expression tag (275)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ezdA (A:)
mtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsr
hgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpm
lapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevl
knyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepws
gagfglerlltirekystvkkggasisylngakingshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ezdA (A:)
tvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsrh
gltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpml
apnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevlk
nyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepwsg
agfglerlltirekystvkkggasisylngakin

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ezdB (B:)
mtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsr
hgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpm
lapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevl
knyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepws
gagfglerlltirekystvkkggasisylngakingshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ezdB (B:)
tvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsrh
gltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpml
apnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevlk
nyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepwsg
agfglerlltirekystvkkggasisylngakin

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ezdC (C:)
mtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsr
hgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpm
lapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevl
knyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepws
gagfglerlltirekystvkkggasisylngakingshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ezdC (C:)
tvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsrh
gltqlmndiadalvaegfievrtpifiskdalarmtitedlfkqvfwidekralrpmlap
nlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevlkny
isvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepwsgag
fglerlltirekystvkkggasisylngakin

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ezdD (D:)
mtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsr
hgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpm
lapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevl
knyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepws
gagfglerlltirekystvkkggasisylngakingshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ezdD (D:)
tvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsrh
gltqlmndiadalvaegfievrtpifiskdalarmtiteplfkqvfwidekralrpmlap
nlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevlkny
isvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepwsgag
fglerlltirekystvkkggasisylngaking