PDB entry 6exi

View 6exi on RCSB PDB site
Description: nad-free crystal structure of s-adenosyl-l-homocysteine hydrolase from bradyrhizobium elkanii complexed with adenosine
Deposited on 2017-11-08, released 2018-09-19
The last revision was dated 2018-09-19, with a file datestamp of 2018-09-14.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenosylhomocysteinase
    Species: Bradyrhizobium elkanii [TaxId:29448]
    Gene: Ahcy
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Adenosylhomocysteinase
    Species: Bradyrhizobium elkanii [TaxId:29448]
    Gene: Ahcy
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Adenosylhomocysteinase
    Species: Bradyrhizobium elkanii [TaxId:29448]
    Gene: Ahcy
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Adenosylhomocysteinase
    Species: Bradyrhizobium elkanii [TaxId:29448]
    Gene: Ahcy
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NA, ADN, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6exiA (A:)
gidpftmnakpgftdyivkdialadfgrkeislaetempglmatreeygpkqplkgaria
gslhmtiqtavlietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteyw
dytaklfdwhgggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkr
llkekpkgwfaeiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnly
gcreslvdgirrgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaa
megyevvtmedaapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrn
lkwtnikpqvdeiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfan
nkdskyakkvyvlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

    Sequence, based on observed residues (ATOM records):
    >6exiA (A:)
gftdyivkdialadfgrkeislaetempglmatreeygpkqplkgariagslhmtiqtav
lietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteywdytaklfdwhg
ggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkrllkekpkgwfa
eiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnlygcreslvdgir
rgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaamegyevvtmed
aapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrnlkwtnikpqvd
eiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfannkdskyakkvy
vlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6exiB (B:)
gidpftmnakpgftdyivkdialadfgrkeislaetempglmatreeygpkqplkgaria
gslhmtiqtavlietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteyw
dytaklfdwhgggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkr
llkekpkgwfaeiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnly
gcreslvdgirrgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaa
megyevvtmedaapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrn
lkwtnikpqvdeiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfan
nkdskyakkvyvlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

    Sequence, based on observed residues (ATOM records):
    >6exiB (B:)
kpgftdyivkdialadfgrkeislaetempglmatreeygpkqplkgariagslhmtiqt
avlietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteywdytaklfdw
hgggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkrllkekpkgw
faeiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnlygcreslvdg
irrgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaamegyevvtm
edaapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrnlkwtnikpq
vdeiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfannkdskyakk
vyvlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6exiC (C:)
gidpftmnakpgftdyivkdialadfgrkeislaetempglmatreeygpkqplkgaria
gslhmtiqtavlietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteyw
dytaklfdwhgggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkr
llkekpkgwfaeiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnly
gcreslvdgirrgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaa
megyevvtmedaapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrn
lkwtnikpqvdeiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfan
nkdskyakkvyvlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

    Sequence, based on observed residues (ATOM records):
    >6exiC (C:)
gftdyivkdialadfgrkeislaetempglmatreeygpkqplkgariagslhmtiqtav
lietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteywdytaklfdwhg
ggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkrllkekpkgwfa
eiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnlygcreslvdgir
rgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaamegyevvtmed
aapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrnlkwtnikpqvd
eiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfannkdskyakkvy
vlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6exiD (D:)
gidpftmnakpgftdyivkdialadfgrkeislaetempglmatreeygpkqplkgaria
gslhmtiqtavlietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteyw
dytaklfdwhgggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkr
llkekpkgwfaeiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnly
gcreslvdgirrgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaa
megyevvtmedaapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrn
lkwtnikpqvdeiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfan
nkdskyakkvyvlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry

    Sequence, based on observed residues (ATOM records):
    >6exiD (D:)
gftdyivkdialadfgrkeislaetempglmatreeygpkqplkgariagslhmtiqtav
lietlaalgadirwvscniystqdhaaaaiaaagipvfavkgetlteywdytaklfdwhg
ggtpnmilddggdatmlvhagyraeqgdtafldkpgseeeeifyalvkrllkekpkgwfa
eiaknikgvseetttgvhrlyemankgtllfpainvndsvtkskfdnlygcreslvdgir
rgtdvmlsgkvamvagfgdvgkgsaaslrqagcrvmvsevdpicalqaamegyevvtmed
aapradifvtatgnkdiitiehmramkdraivcnighfdneiqiaslrnlkwtnikpqvd
eiefpdkhriimlsegrlvnlgnamghpsfvmsasftnqtlaqielfannkdskyakkvy
vlpktldekvarlhlakigvkltelrkdqadyigvkqegpyksdhyry