PDB entry 6esd

View 6esd on RCSB PDB site
Description: crystal structure of l-tryptophan oxidase vioa from chromobacterium violaceum
Deposited on 2017-10-20, released 2017-12-06
The last revision was dated 2017-12-06, with a file datestamp of 2017-12-01.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Flavin-dependent L-tryptophan oxidase VioA
    Species: Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) [TaxId:243365]
    Gene: vioA, CV_3274
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Flavin-dependent L-tryptophan oxidase VioA
    Species: Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) [TaxId:243365]
    Gene: vioA, CV_3274
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FAD, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6esdA (A:)
khssdicivgagisgltcashlldspacrglslrifdmqqeaggrirskmldgkasielg
agryspqlhphfqsamqhysqksevypftqlkfkshvqqklkramnelsprlkehgkesf
lqfvsryqghdsavgmirsmgydalflpdisaemaydivgkhpeiqsvtdndanqwfaae
tgfagliqgikakvkaagarfslgyrllsvrtdgdgyllqlagddgwklehrtrhlilai
ppsamaglnvdfpeawsgarygslplfkgfltygepwwldyklddqvlivdnplrkiyfk
gdkylffytdsemanywrgcvaegedgyleqirthlasalgivreripqplahvhkywah
gvefcrdsdidhpsalshrdsgiiacsdaytehcgwmeggllsareasrlllqria

    Sequence, based on observed residues (ATOM records):
    >6esdA (A:)
khssdicivgagisgltcashlldspacrglslrifdmqqeaggrirskmldgkasielg
agryspqlhphfqsamqhysqksevypftqlkfkshvqqklkramnelsprlgkesflqf
vsryqghdsavgmirsmgydalflpdisaemaydivgkhpeiqsvtdndanqwfaaetgf
agliqgikakvkaagarfslgyrllsvrtdgdgyllqlagddgwklehrtrhlilaipps
amaglnvdfpeawsgarygslplfkgfltygepwwldyklddqvlivdnplrkiyfkgdk
ylffytdsemanywrgcvaegedgyleqirthlasalgivreripqplahvhkywahgve
fcrdsdihpsalshrdsgiiacsdaytehcgwmeggllsareasrlllqria

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6esdB (B:)
khssdicivgagisgltcashlldspacrglslrifdmqqeaggrirskmldgkasielg
agryspqlhphfqsamqhysqksevypftqlkfkshvqqklkramnelsprlkehgkesf
lqfvsryqghdsavgmirsmgydalflpdisaemaydivgkhpeiqsvtdndanqwfaae
tgfagliqgikakvkaagarfslgyrllsvrtdgdgyllqlagddgwklehrtrhlilai
ppsamaglnvdfpeawsgarygslplfkgfltygepwwldyklddqvlivdnplrkiyfk
gdkylffytdsemanywrgcvaegedgyleqirthlasalgivreripqplahvhkywah
gvefcrdsdidhpsalshrdsgiiacsdaytehcgwmeggllsareasrlllqria

    Sequence, based on observed residues (ATOM records):
    >6esdB (B:)
khssdicivgagisgltcashlldspacrglslrifdmqqeaggrirskmldgkasielg
agryspqlhphfqsamqhysqksevypftqlkfkshvqqklkramnelsprlkehgkesf
lqfvsryqghdsavgmirsmgydalflpdisaemaydivgkhpeiqsvtdndanqwfaae
tgfagliqgikakvkaagarfslgyrllsvrtdgdgyllqlagddgwklehrtrhlilai
ppsamaglnvdfpeawsgarygslplfkgfltygepwwldyklddqvlivdnplrkiyfk
gdkylffytdsemanywrgcvaegedgyleqirthlasalgivreripqplahvhkywah
gvefcrdsidhpsalshrdsgiiacsdaytehcgwmeggllsareasrlllqria